Pseudomonas hormoni: KJF94_03255
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Entry
KJF94_03255 CDS
T09556
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
phom
Pseudomonas hormoni
Brite
KEGG Orthology (KO) [BR:
phom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phom03021
]
KJF94_03255 (rapA)
Transcription machinery [BR:
phom03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
KJF94_03255 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QVW24614
LinkDB
All DBs
Position
complement(711762..714608)
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFSPG
DSITHFEGWKLTVQEVDDVDGLLVYHGLNAQNEVVTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYHTLEHTSRQLQSSLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRANRVLILVPENLQHQWLVEMRRRFNLQVALFDEERFIESDA
ANPFEDTQLALVALEWLVEDEKAQDALFAAGWDLMVVDEAHHLVWHEDKASPEYSLVEQL
AEVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLHAFRAESENYRPVAEAVQELLDK
GRLSPEAHKTIHGFLGNEGEALLTAVNDGDTEASARLVRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHPYPLPCPDEYLELPLGDHAELYPEVSFQAQPDANEEERWWKFDPRVEWLIDT
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFSHHLVLFDLPSHPDLLEQRIGRLDRIGQKHIIELHVPYLETSP
QERLFQWYHEALNAFLNTCPTGNALQHRFGPRLLPLLENADDGEWQALIDEARAERERLE
AELHTGRDRLLELNSGGAGEGDALVEDILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLSARVSF
ETLNDQLESVPRASANKFIQAQRDQLTPRINAGEEKIFPRHAERVAEAQRRLAADTDEEL
ARLTALQAVNPTVRDSELVALRKQREQGLAMLDKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagtgacagcgaagccgagctgggt
ttgggcaccgttctggcacaggacggccgcttgttgaccgtgctctatccggccactggc
gacactcgccagtacgcgctacggaatgcgcccctcacccgcgtgcggttttcgccgggt
gactcgatcactcacttcgaaggctggaaactgactgtccaggaagtcgacgacgtcgac
ggcctgctggtctaccacggcctcaacgcgcagaacgaagtggtcaccctgccggaaacc
cagctgtcgaacttcattcagttccgtctggccagcgaccgtctgttcgccgggcagatc
gacccgctggcctggttctccctgcgctaccacacgcttgaacacaccagccgccagttg
caatcctccctctggggcctgggtggcgtgcgtgcgcaaccgatcgcgcaccagctgcac
atcgcccgtgaagtggccgaccgcattgcgccccgggttctgctggcggacgaagtgggc
ctgggcaagaccatcgaagccggcctggtaatccaccgccaactgctgtcgggccgcgcc
aaccgcgtgctgatcctggtgccggaaaacctgcagcaccagtggctggtggagatgcgc
cgccgcttcaacctgcaagtcgcgctgttcgacgaagaacgcttcatcgaaagcgatgcc
gccaacccgttcgaagacacccagctcgcgctggttgcgctggaatggctggtagaagac
gagaaggctcaggacgcgctgttcgccgccggttgggacttgatggtcgtcgacgaagcc
caccacctggtgtggcacgaagacaaggccagcccggaatactcgctggtcgaacaactc
gccgaagtcattcccggcgtattgctgctgaccgcgaccccggaacaactgggtcaggac
agccacttcgcacgcctgcgcctgctcgacccgaaccgtttccatgacctgcacgctttc
cgcgccgagagcgaaaactatcgcccggtggccgaagccgttcaggagctgctggacaag
gggcgcctgtcgcctgaagcgcacaagaccattcacggtttcctcggcaacgaaggcgaa
gcgctgctgaccgccgtcaacgatggcgataccgaagccagcgcccgtctggtccgcgag
ctgctcgaccgccacggcaccggccgcgtgctgttccgtaatacccgcgccgcggtgcag
ggtttcccggaacgcaaactgcacccgtatccgctgccatgccccgacgaatacctcgaa
ctgccgctgggcgatcacgccgagctgtacccggaagtcagcttccaggcccagccggac
gccaacgaagaagagcgctggtggaaattcgacccgcgcgtcgaatggctcatcgatacg
ctgaagatgctcaagcgcaccaaagtactggtgatctgcgcccacgccgaaaccgccatg
gacctggaagacgccctgcgcgtacgctccggcatcccggccacggtgttccacgagggc
atgaacatcctcgagcgtgaccgcgccgctgcctacttcgccgatgaagagttcggcgcg
caagtgctgatctgctcggaaatcggcagtgaaggtcgcaacttccaattctcgcaccat
ctggtgctgttcgatctgccgtcgcacccggacctgctggagcagcggatcggtcgtctg
gaccggatcggccagaagcacatcatcgaactgcacgtgccgtacctggaaaccagcccg
caagagcggttgttccagtggtatcacgaagccctgaatgcgttcctcaacacctgcccg
accggcaacgccttgcagcaccggttcggcccgcgcctgctgccgctgctggaaaatgcc
gacgatggcgagtggcaagcgctgatcgacgaagcccgcgccgagcgcgagcgtctggaa
gccgagctgcacaccggccgtgaccgtttgctggagctcaactccggcggcgctggtgaa
ggtgatgcgctggtcgaggacattcttgagcaagacgatcaattcgccctgccgatctac
atggaaaccctgttcgacgccttcggcatcgacagcgaagaccattcggaaaacgcgctg
atcctcaagccaagtgaaaaaatgctcgacgccagcttcccgctgggcgacgacgaaggc
gtgaccatcacctacgaccgcaaccaggcgctgtctcgcgaagacatgcagttcatcacc
tgggaacacccgatggtgcagggcggcatggacctggtgctgtccggctcgatgggcaac
accgccgtggcactgatcaagaacaaggcgctgaaacctggcaccgtgttgctggaactg
ctctacgtcagcgaagtggttgcgccgcgctcgctgcaactgggccgttacctgcccccg
gccgcgctgcgctgcctgctcgatgccaatggcaacgacctgtcggcccgggtgtcgttc
gaaaccctgaacgatcaactggaaagcgtgccgcgtgccagcgccaacaagttcatccag
gcccagcgcgatcagctgacgccacggatcaacgcgggtgaagagaagatcttcccgcgt
cacgccgagcgtgtggctgaggcgcagcgtcgcctggcggccgacaccgacgaagaactg
gcacgcctgactgcgttgcaagcggtcaacccgaccgtacgtgacagcgaactggttgcc
ttgcgtaaacagcgtgagcaaggtctggccatgctcgacaaggctgcgttgcgactggaa
gcgattcgggtgttggtggcgggttaa
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