Pseudomonas hormoni: KJF94_09600
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Entry
KJF94_09600 CDS
T09556
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
phom
Pseudomonas hormoni
Pathway
phom03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KJF94_09600 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phom03400
]
KJF94_09600 (uvrA)
DNA repair and recombination proteins [BR:
phom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KJF94_09600 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KJF94_09600 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_21
DnaJ_CXXCXGXG
nSTAND1
AAA_29
AAA_16
AAA_25
RsgA_GTPase
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
QVW25769
LinkDB
All DBs
Position
2034093..2036726
Genome browser
AA seq
877 aa
AA seq
DB search
MTSKRIPNPPSGMVRVRGAREHNLKNIDVDIPRDALVVFTGVSGSGKSSLAFSTLYAEAQ
RRYFESVAPYARRLIDQVGVPDVDSIEGLPPAVALQQQRGTPSTRSSVGSVTTLSSLIRM
LYSRAGSYPPGQPMLYAEDFSPNTPQGACPECHGLGRVYEVTEALMVPDPSLTIRQRAVA
SWPTAWQGQNLRDILVTMGYDVDKPWRDLPKKQRDWILFTEETPTVPVYAGLTPEETRVA
LKRKMEPSYQGTFTGARRYILHTFTHSQSALMKKRVSQFMLGSPCPLCDGKRLKREALSV
TFAGYDIGELSQMPLLQVAEVLKPVAAHSYLEQADEAGEVLTHDQTREAREQRVAHGASG
HTNAPDVRHTPNLSVEKRLAAQRIAQDLLERVSTLTDLGLGYLALERSTPTLSSGELQRL
RLATQLGSQLFGVIYVLDEPSAGLHPADGEALFEALQRLKAAGNTLFVVEHDLETMRRAD
WLIDVGPAAGEHGGRILYSGPPQGLAEVTNSQTRAYLFADQVSQPRTSRKPTDWLRLEGI
TRNNLSNLSVEFPLGCFTSVTGVSGSGKSSLVSQALLELVGAHLGRGGSDSEPEELSLED
DAPQVSGGQVSAGLESIKRLVQVDQKPIGRTPRSNLATYTGLFDNVRKLYAATAEAQAEG
YDAGQFSFNVAKGRCPTCEGEGFVSVELLFMPSVYAPCPTCHGARYNPETLAITWQGLNI
AQVLQLTVDEAVEVFVEQPGIRRSLEVLRDIGLGYLRLGQPATELSGGEAQRIKLATELQ
RNQRGATLYVLDEPTTGLHARDVDRLLEQLNTLVKAGHTVIVVEHEMRVVAQSDWVIDIG
PGAGDQGGRIVAAGTPQKVANSKKSRTAPFLAKTLNL
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgacttccaagcgcattcccaatcctccttccggcatggtcagagtgcgcggtgcccgt
gaacacaacctcaagaacatcgacgtcgatatcccgcgtgatgcgctggtggtgttcacc
ggcgtatccggttcggggaaatcgtccctggcattctcgaccctgtacgccgaagcgcag
cggcgctatttcgagtctgtggcgccgtatgcgcggcgcctgatcgatcaggtcggcgtg
ccggacgtcgattccatcgaaggcctgccgcccgcggtcgccttgcaacaacagcgaggc
acaccgagtacccggtcttcggtgggcagcgtgaccacgttgtcgagcctgatccgcatg
ctgtactcccgcgccggcagttatccgccggggcagccgatgctctatgccgaagacttt
tcgcccaacacaccacaaggcgcttgccctgaatgtcatggtttgggccgggtgtacgaa
gtcaccgaagccctgatggtcccggacccgagcctgaccattcgccagcgtgcggtcgct
tcctggcccacggcgtggcagggacagaacctgcgggacatcctcgtgaccatgggctat
gacgtcgacaagccctggcgcgacctgccgaaaaagcaacgcgactggattctcttcacc
gaggaaaccccgaccgttccggtgtatgccgggctcacaccggaagaaaccagagtcgcc
ctcaagcgcaaaatggagccgagttatcagggcaccttcaccggtgcccggcgttacatc
ctgcacaccttcacccattcgcaaagtgcgttgatgaagaagcgggtctcgcaattcatg
ctcggcagcccgtgcccgctgtgcgacggcaaacggcttaaacgcgaggcgttgtcggtg
acgttcgccggttacgacatcggcgagttgtcgcagatgccgttgctgcaagtggccgaa
gtcttgaagccggtggccgctcacagttacctcgaacaggccgatgaggcgggcgaggtg
ctgacccacgaccagacccgcgaagcccgtgagcagcgagtcgcccacggcgccagtggt
cacaccaacgcgccggatgttcgtcacacgccgaacctgtcggtggaaaaacgcctggcg
gcgcaacggatcgctcaggatttgctggagcgggtcagcacgctgaccgatctggggctc
ggttacctggcgctggagcgcagcacgccgacgttgtcgtccggtgagttgcagcggttg
cgcctggcgacgcaattgggttcgcaattgttcggggtgatttacgtactggatgaaccg
tccgccggtctgcacccggcggatggcgaagcgctgttcgaagccttgcagcgcttgaaa
gccgcgggcaacaccttgttcgtggtcgagcatgacctggaaaccatgcgccgcgccgac
tggctgatcgatgtgggcccggcggcgggcgagcatggcggccgcatcctgtacagcggg
ccgccccagggtctggccgaagtgacgaactcgcagacccgcgcgtacctgttcgccgat
caggtcagtcaaccgcgaaccagccgcaagccgaccgattggttgcggctggagggcatc
acccgtaacaacctgagtaacctcagcgtcgagtttccgctgggttgtttcacctcggtg
accggcgtttcgggttccggtaaatcaagcctggtcagccaggcgctgctggaactggta
ggcgcacatctcgggcgtggggggagtgacagcgaacccgaagaactgagcctggaagac
gatgcaccgcaagtcagtggtggtcaggtcagcgcagggctggaatcgatcaagcggctg
gtgcaagtcgatcagaaacccatcggccgcacgccgcgctcgaacctggcgacctacacc
gggctgttcgacaacgtgcgcaagctgtacgccgcgacagccgaggcgcaggccgagggc
tacgacgccggtcagttctccttcaacgtcgccaagggccgctgcccgacctgcgaaggc
gaaggctttgtcagcgtcgaattgctgttcatgcccagcgtctacgcgccatgcccgacg
tgccacggtgcacgctacaaccccgaaacgctggcgattacctggcagggtttgaacatt
gcccaggtgttgcagttgacggtggacgaagcggtcgaggtgttcgttgagcagccgggt
atccggcgctcgctggaagtgctgcgggatatcggtctgggttatctgcgtctcgggcag
ccggcgaccgagttgtccggcggtgaagcccagcggatcaaactggccaccgaactgcaa
cgcaaccagcgcggcgcgaccttgtatgtgctcgacgagcccaccaccgggttgcatgcg
cgagacgtcgatcgcttgctcgagcaattgaatacgctggtcaaggcagggcacacggtg
attgtcgtcgagcatgaaatgcgcgtggtggcgcagagcgactgggtgatcgacattggg
ccgggggcaggggatcagggcggcaggattgtggcggcagggacgccgcagaaagtcgcc
aacagcaaaaagagccggacggcgccatttctcgcgaaaaccctcaacctgtag
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