Pseudomonas hormoni: KJF94_10325
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Entry
KJF94_10325 CDS
T09556
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
phom
Pseudomonas hormoni
Brite
KEGG Orthology (KO) [BR:
phom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phom03400
]
KJF94_10325
DNA repair and recombination proteins [BR:
phom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KJF94_10325
Archaeal homologous recombinant proteins
KJF94_10325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_21
SMC_N
AAA_29
ABC_tran
nSTAND3
MMR_HSR1
AAA_22
E2R135
Motif
Other DBs
NCBI-ProteinID:
QVW25901
UniProt:
A0ABX8F3C2
LinkDB
All DBs
Position
complement(2199962..2203603)
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LSNAQVSAKAPDADGEISTGDPRTLLRRGTGEGYAEVDFVGIDGRRYRARWEANRAREKA
GGKLQHSRQSLRDIDLDQLLASQKVEFKIQLETVLGLNFEQFTRAVLLAQSEFSAFLKAN
DNERSELLEKLTDTALYTRLGRRAFDKTKEARETHKLLQDQATGVTPLSPEARAELDERF
NEAQQQLKSQQAQLKQLELQHTWLKELRQLQDEQLSATEQLTSAQQDWQSLAGERLKLTR
LEHLAPQRHQFARQTELSARLTPLAEQIQQHTRQEQELQTRQTQLEHSLSEAQTALVEAQ
SQHTSSAPLLRQAFEAQSTLARLIKDTGLSADLKQQAELACSEGQQTIQGLLDQQNRVAE
RLQRIAAELEQSTHLAPLSDAWNAYRDRLQQLMLIGNRLNKGQAELASLEQNATRAAEEW
AAQKQNLEVLYKEAGAEPEAVAEQIQLLGNLLQDNRKQLRSFEELTRLWASQQELDKRIS
ELQQRQTVAQQERDRLTQDGVKTKNELTVAEQTLTVTRELLERQRLARSASVEELREQLQ
DDQPCPVCGSPDHPYHQPEALLQSLGRHDESEQANAQKAVDLLKEKLTDLRTEVGGVIAQ
QKELLQQQEQLVAQQQSLTPSLDAHPLSAQLFTQDSAKRDAWLNQQNSQLNQSITQDEQR
QTALLTLQQDAARLQQQLRSAETASLQATQHLANQQRELNNDRQRLDEELTAFSTLLPAD
TLDALRNEPAATFMQLDRQIAQRLEQLDQQRDELSEQQQRQQTLEKEQVRQLTRVQQLEA
AQQQFATLAEQQQACQQQLTHLLGSHSSADQWQQQLNQAVEQARNAETAANQELQSVRTR
LVQLAAELKAQQDRLIALETENHELNTKIADWRALHPELDDGGLEQLLSVDDQQVSELRQ
RLQHNEKAIEQAKVLLQERDKRLTTHQAQHNGNLDAEQLATALTTLQSQFAASEHRSAEL
RAEQAEDQRRQNANQALAQQIADAYTEYQRWARLNALIGSASGDTFRKIAQAYNLDLLVH
HANVQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
HRQGNGLSTLEVK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcgcgatccgcctgaaaaacctcgcctcgttggccgggccgtttgaaatc
gatttcaccgccgaacccttggccagcgccggtttgttcgcgatcaccgggccgaccggc
gccggcaaaagcaccttgctcgatgccttgtgcctggcgctgttcggcgccgtgcctcga
ctgagcaacgctcaagtgtcggccaaagcgccggacgccgatggcgagatcagcaccggc
gaccctcgcacgctgctgcgtcgcggcaccggtgaaggctatgccgaagtcgatttcgtc
ggcatcgatggccgccgctaccgtgctcgctgggaagccaatcgcgcccgggagaaggct
ggcggcaagctgcaacacagccgtcagagcttgcgcgacatcgacctggatcagttgctg
gccagtcagaaagttgaattcaaaatccagctcgaaaccgtcctcggcctgaacttcgag
cagttcacccgcgctgtgttactggcacaaagtgagttcagtgcgttcctcaaggccaac
gacaacgagcgcagcgaactgctggaaaaactcaccgacaccgcgctctacacgcgcctg
ggtcgtcgcgcgttcgacaagaccaaagaagcccgcgaaacccacaagctgttgcaggat
caggccaccggcgtcacaccgctgtcgcccgaagcccgtgcagaactggatgaacgcttc
aatgaggcgcagcagcaactcaagtcccagcaagcgcaactcaagcaactagagctgcaa
cacacgtggttgaaagagctacgccagttgcaggacgagcagctcagcgccaccgaacaa
ctgaccagcgcccagcaggattggcaaagcctggccggcgaacgcttgaagctgacgcgt
ctggaacacctggcgccccaacggcaccagttcgcccgtcagaccgaactcagcgcccgg
ctcacgccgctggcagagcagattcagcagcacacccggcaagaacaggaactgcagacg
cgtcagacgcaactcgaacacagcctgagcgaggcgcaaacggcgctggtcgaggcgcaa
agccaacacacgtcaagcgcgccactgctgcgtcaggcctttgaggcgcaaagcaccctc
gcccgcctgatcaaggacaccggcctcagtgccgacctcaagcaacaagcggaactggcc
tgctctgaaggccaacagacgattcaaggtttgctcgatcagcagaatcgggttgccgag
cgcctgcaacggattgccgccgagcttgagcaaagcactcatcttgcgccgctcagcgac
gcctggaacgcctaccgcgaccgcctgcagcagttgatgctgatcggcaatcgcctgaac
aagggtcaggccgaactggcgtctctggaacagaacgctacccgtgccgccgaagaatgg
gccgcgcaaaaacagaatctggaagtgctctacaaagaggccggtgccgagccggaagcg
gtggccgaacagatccagttgctgggtaatctgttgcaagacaatcgcaagcaactgcgc
agctttgaggaactgacgcgtctatgggccagccagcaggagctggacaaacgcatctcc
gaactgcaacaacgccagaccgttgcccaacaggaacgtgaccgtctgacccaggacggg
gtgaaaaccaaaaacgaattgaccgtcgctgaacagaccctgacggtgacccgcgaactg
ctggaacgtcagcgcttggctcgcagcgccagcgtcgaagaactgcgcgagcagttgcag
gatgatcagccgtgcccggtctgcggcagcccggaccatccttaccatcagcccgaagcg
ctgctgcaaagcctcggccgccatgatgaaagcgaacaggccaacgcgcagaaagcggtg
gatttgctcaaggaaaaactcactgacctgcgtaccgaagtcggcggtgtgatcgcgcaa
cagaaggaattgctgcaacagcaggaacaactggtcgctcagcagcaaagcctgacaccg
agcctcgatgcgcatccgttatccgcgcagcttttcactcaggacagcgccaaacgcgat
gcctggctgaaccagcaaaacagccagctgaaccaaagcatcacccaggacgaacagcgg
caaaccgccctactcaccctgcaacaggatgcggcgcggctgcaacagcaactgcgcagc
gccgaaaccgcgagcctgcaggcgacccagcatctggccaaccagcaacgcgagctgaac
aacgaccgccagcgtctggacgaagaactgaccgcattcagcaccctgctcccggccgac
acactggacgccttgcgcaacgagcctgccgcgaccttcatgcaactcgaccgacagatc
gcccagcgcctggaacaactcgaccagcaacgggatgaactcagcgaacagcagcaacgc
cagcagacgctggaaaaggaacaggttcgtcaactgacccgcgtccagcagctggaggcg
gctcagcagcagttcgccaccctcgccgagcagcaacaggcttgccagcaacaactgacg
catctgctcggttcacacagcagcgctgatcagtggcagcagcaactgaatcaggctgtc
gaacaggcgcgcaacgccgaaacggctgcgaatcaggaactgcaatcggtacgtacgcgg
ctggtgcaactggccgcggaactgaaagcgcagcaagaccgcctgatcgccctggaaacc
gaaaaccacgaactgaatacgaagatcgccgactggcgcgccttgcatccggaactggat
gacggcggtctggaacagttgctcagcgtcgacgaccagcaggtcagcgaattgcgccaa
cggttgcagcacaacgaaaaagccatcgaacaagccaaagtgttgttgcaggagcgggac
aagcgcctgaccactcaccaggcacagcacaacggcaatctcgatgccgagcaactggct
accgccctgaccacactgcaaagccagtttgccgccagcgagcaccgcagcgccgaactg
cgcgccgaacaggccgaggatcagcgccggcaaaacgccaatcaggcgttggcccaacag
atcgccgacgcctacaccgagtaccagcgctgggcgcgtctgaatgcgttgatcggttcc
gccagcggcgacaccttccgcaagatcgcccaggcctacaacctcgacctgctggtgcat
cacgccaacgtacagctacggcaactggtgcggcgctatcgcttgaaacgcggcggcagc
atgctcgggttgctggtgatggacaccgagatgggcgacgaactgcgctcggtgcattcg
ttgtccggcggcgaaaccttcctcgtctccctggcgctggcattgggtctggcgtcgatg
gcgtcgagcacattgaaaatcgaatcgctgtttatcgacgaaggcttcggcagtctcgat
ccggaatccctgcaactggccatggatgccctcgacggtttgcaggctcagggtcgcaag
gtcgcggtgatttcccacgtacaggaaatgcacgaacggataccggtgcagatccaggtc
caccgccagggcaacggtttgagtacgctggaggtgaaatga
DBGET
integrated database retrieval system
