Pseudomonas hormoni: KJF94_10615
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Entry
KJF94_10615 CDS
T09556
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
phom
Pseudomonas hormoni
Pathway
phom03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
phom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
KJF94_10615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phom03400
]
KJF94_10615
DNA repair and recombination proteins [BR:
phom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
KJF94_10615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QVW25959
LinkDB
All DBs
Position
complement(2266344..2267216)
Genome browser
AA seq
290 aa
AA seq
DB search
MARAIWKGAISFGLVHIPVALVSATSSQGVDFDWLDSRSMDPVGYKRVNKVTGKEVTKEN
IVKGVQYEKGRYVVLSEEEIKSAHPLSTQTIDIFSFVDSDQIPLQNIDTPYYLAPDKRGG
KVYALLRETLSKTNKVALAHVVLHTRQHLAALMPLDSAMVLVMLRWPAEVRSLDTLELGS
EVTKPELAKGELDMAKRLVQDMSGDWSPDDYRDGFEDKIMALVEKKANEGKIEDVETATG
EEERKTADVIDLTELLKRSLGGKAGGKTAAKPKAADKPAAAKKATKRSSG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcacgggcaatctggaaaggcgcaatcagtttcgggctggtgcatatccctgtggcg
ctggtctcggcgacgtcttcgcaaggggtggatttcgactggctcgacagccgcagcatg
gacccggtgggttacaagcgcgtcaacaaggtgaccggcaaggaagtgaccaaggagaac
atcgtcaaaggtgtgcaatacgaaaagggtcgatatgtggtgctcagtgaagaggaaatc
aaatcggcgcatccactgtccacgcagaccatcgacattttttcctttgtcgacagtgat
caaatccccctgcaaaacatcgacacgccctactacctcgcgccggacaaacgcggtggc
aaagtctatgcgctgttgcgtgaaaccctgagcaaaaccaacaaggtcgccctcgcccat
gtcgttttgcacacccgtcagcatctggccgcgctgatgccgctggactcggcaatggtg
ttggtaatgctgcgctggccagcggaagtacgcagcctcgacacgctggaactgggcagc
gaggtgaccaaaccggaactggccaagggtgaactggacatggccaaacgcctggtgcag
gacatgagcggagactggagccccgacgattatcgcgacggttttgaagacaagatcatg
gcgttggtcgagaagaaggcgaatgaagggaagatcgaggatgtcgagacggcgacgggc
gaggaagagcgcaagacggcggatgttatcgatttgaccgagttgctgaaacgcagtttg
gggggcaaggctggcgggaagacggctgcgaaaccgaaggcagcggataaaccggcggcg
gcgaaaaaagcgaccaagcggtcgagtggttga
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