Pseudomonas hormoni: KJF94_10940
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Entry
KJF94_10940 CDS
T09556
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
phom
Pseudomonas hormoni
Pathway
phom03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phom00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KJF94_10940
09124 Replication and repair
03420 Nucleotide excision repair
KJF94_10940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phom03021
]
KJF94_10940
03036 Chromosome and associated proteins [BR:
phom03036
]
KJF94_10940
03400 DNA repair and recombination proteins [BR:
phom03400
]
KJF94_10940
Enzymes [BR:
phom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
KJF94_10940
Transcription machinery [BR:
phom03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KJF94_10940
Chromosome and associated proteins [BR:
phom03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
KJF94_10940
DNA repair and recombination proteins [BR:
phom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KJF94_10940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Helicase_C
Maf_flag10_N
Motif
Other DBs
NCBI-ProteinID:
QVW26019
UniProt:
A0ABX8F288
LinkDB
All DBs
Position
2345588..2347879
Genome browser
AA seq
763 aa
AA seq
DB search
MSYSIAVRALCEFTAKVGDLDLRFTPSPTALEGIVGHRTVASRRSDGYQSEVALEGLYQT
LKVKGRADGYDPVQNCLEEVKTYRGDLSKQPANHRQLHWAQAKVYGWLMCQKLDLAQINL
ALVYFDIVSEKETCLVEAFSADALKTFFEHHCQLFLRWAEQEMAHREARNAAAQQLAFPH
VDFRPGQRHLAESVFKAVSTGRCLMAQAPTGIGKTVGTLFPMLKALAPQQLDKVFFLTAK
TPGRKLALDAAQVILDSAAAPPLRVLEMIARDKACEHPDKACHGESCPLAQGFYDRLPAA
RQAASELTLLNQNALREVALKHNVCPYYLSQEMARWADVVVADYNYYFDFSALLFGLAQA
NNWKVAVLVDEAHNLVERGRQMYSASLDQSALNGVRKTAPEPLKKTLQRVNREWNALHNL
QLAPYQAYDKPPEKLLQALSSCSASIGDYLNDHPQGLDSALQTFYFDMLQFCRVAELFDE
QFLFDISKRDLDRQRNLSQLCLRNVVPAGFIRPRLTAARSTVLFSATLSPRHYYADLLGT
PANTVWIDVESPFHADQLKVHIVSQISTRFVHRQSSLAPIVELIARQFSQRPGNYLAFFS
SFDYLQQVAQLLAETHPHINLWSQSRGMGEGQRQDFLDQFTAHSQGIGFAVLGGAFGEGI
DLPGARLIGAFIATLGLAQLNPVNEQLKHRMAAIFGAGYDYAYLFPGVQKVVQAAGRVIR
TQQDQGVVMLIDDRFGDSKVRQLLPRWWSVGDSRLCIGATPLP
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
ttgagctacagcatcgcggtgcgggcgttgtgtgagttcaccgccaaggtcggcgacctc
gacctgcgcttcacaccctcgccgactgcactggaaggcatcgtcggccaccggacggtg
gcgtcccggcgcagcgacggttatcagagtgaagtcgcgcttgaaggcctgtatcaaacg
ttgaaggtcaaaggcagggcggacggctacgacccggtgcaaaactgcctggaagaagtc
aaaacctaccgcggcgacctgagcaagcagccggccaatcatcgtcaactgcactgggcg
caggccaaggtctacggctggttgatgtgccagaaactggacctggcgcagatcaacctg
gcgctggtgtatttcgacatcgtcagcgaaaaggagacctgcctggtcgaggctttcagc
gctgacgcactgaagacgttcttcgaacaccattgccaactgttcctgcgctgggccgaa
caggaaatggcccatcgcgaagcacgcaacgctgcggcgcagcaactggcgtttccccat
gtcgattttcgtccggggcaacggcatctggcggagtccgtgttcaaggccgtcagcact
ggccgttgcctgatggcccaggcgccgaccggtattggcaagaccgtcggcacgctgttt
ccgatgctcaaggccctggcaccgcagcagctggacaaagtgtttttcctcacggcaaaa
acccccgggcgcaaactggcgctcgatgcggcgcaggtcattctcgacagcgccgctgcg
ccaccgttgcgggtcctggaaatgatcgcccgggacaaggcctgcgagcatccggacaag
gcctgccatggcgaatcctgcccgttggcccagggtttctatgatcggttgccggccgcg
cgccaggccgccagcgagctgacgctgttgaaccagaacgccttgcgcgaagtggccctg
aagcacaacgtctgcccttattacctgagccaggaaatggcccgttgggccgacgtggtg
gttgctgactacaactactatttcgatttcagcgcgctgttgttcgggctggcccaggcc
aacaactggaaagtcgcggtcctggtggacgaagcccacaatctggtggagcgcgggcgg
cagatgtacagcgccagccttgaccagtcggcgctcaacggtgtgcgcaaaaccgctccc
gagcccttgaagaaaaccttgcaacgggtcaatcgcgagtggaacgccctgcataacctg
caactcgcgccgtaccaggcctacgacaaaccaccggagaaactgctccaggcattgtcg
tcatgcagcgcgagcatcggcgactacctcaatgatcatccccagggcctggacagcgcc
ttacagactttctatttcgacatgctgcaattctgccgcgtcgccgagctcttcgatgag
cagttcctgttcgacatcagcaagcgcgacctcgaccgccaacgcaacctgtcgcaactg
tgcctgcgcaacgtggtgcccgccggtttcatccgcccgcgcctgacggcggcacgcagc
accgtgctgttttccgcgacgttgagtccgcgccattactacgccgatttactcggaacg
ccggcgaacacagtctggatcgacgtcgagtcaccgtttcacgctgaccagttgaaggtc
catatcgtcagccagatttccacgcggtttgtccatcgacagtcttctctggcgccgatc
gtcgagctgatcgccaggcaattcagccaacgcccaggcaattacctggcgtttttcagc
agcttcgattacttgcagcaagtcgcacagttgctggccgagacccatccacacatcaat
ctctggtcgcaatcccggggcatgggggaagggcagcgtcaggactttctcgatcagttc
actgcgcatagccagggcatcggtttcgcggtactgggcggggcatttggcgaaggcatc
gacttgcccggtgcccggttgatcggcgcttttatcgccaccctcggactggcgcaactc
aacccggtcaatgaacagttgaaacatcggatggcagcaattttcggagccggttatgac
tacgcctacctgtttcccggcgtgcagaaagtagttcaggcggccggacgcgtgatccgc
acccaacaggatcaaggggtggtgatgttgatcgatgaccggtttggcgacagcaaggtc
aggcagctcctgccgcgttggtggtcggtcggggactcacgcttgtgcattggagcaacc
ccattgccatga
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