Pseudomonas hormoni: KJF94_12445
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Entry
KJF94_12445 CDS
T09556
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
phom
Pseudomonas hormoni
Pathway
phom02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
phom00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KJF94_12445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phom03021
]
KJF94_12445
Transcription machinery [BR:
phom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KJF94_12445
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
NirdL-like_HTH
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QVW26293
UniProt:
A0ABX8F5V1
LinkDB
All DBs
Position
2687071..2687595
Genome browser
AA seq
174 aa
AA seq
DB search
MMVADSSSIQNLYVTHHRWLHELLRRRLSNAFDAADLAHDTFIRVLKRPQVFDCETRERS
YLATIARGLCIDHWRRRQLEQAWLETLASRPQAVQPSPEQRAIIVETLYEVDAMLMRLPK
NVRDAFILAQLHGLPYRAIAEEIGVCERMVKKYLAQALMHCAMLEAELDGLLIE
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgatggtcgccgattcctccagcattcagaacctctacgtcactcatcaccgctggttg
catgagttgctgcgccgtcgcttgagcaatgcgttcgatgccgccgaccttgcccatgac
accttcatccgggtgctcaagcgcccgcaggtgttcgactgcgaaacccgcgaacgctct
tacctggccaccatcgcccggggcttgtgcatcgatcactggcgccgtcggcaactcgaa
caggcatggctcgagacgctggcctcgcgcccgcaagccgttcaaccgtcgccggagcaa
cgggcgatcatcgtcgaaaccctgtacgaagtggacgcgatgctgatgcgcctgcccaag
aatgtgcgcgacgcgttcatcctcgcccagttgcacggcctgccctaccgagccatcgcc
gaagaaatcggcgtgtgcgagcgcatggtgaaaaagtacctggcgcaagcgctgatgcat
tgcgcgatgctcgaagccgagcttgacggcctgttgatcgagtaa
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integrated database retrieval system
