Pseudomonas hormoni: KJF94_17005
Help
Entry
KJF94_17005 CDS
T09556
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
phom
Pseudomonas hormoni
Pathway
phom02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
phom00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KJF94_17005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phom03021
]
KJF94_17005
Transcription machinery [BR:
phom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KJF94_17005
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_24
GerE
HTH_20
HTH_38
HTH_Tnp_4
AlcCBM31
HTH_11
HTH_40
TnsD
Motif
Other DBs
NCBI-ProteinID:
QVW21607
UniProt:
A0ABX8ESC4
LinkDB
All DBs
Position
3632594..3633100
Genome browser
AA seq
168 aa
AA seq
DB search
MSSADQPSNQHIHTLYSEHHGWLQGWLHRKLGNRCDAADLAHDTFLRLLTRQVVKPFGSE
PRALLTHIAKGLVIDRWRRQDIERAYLETIAQLPVAEVPSPETRLLILETLMRIEALLRE
LPTVTRDTFMLSQIEGLTYAQIATRLGVSLITVKRHMRAAFIACLSVA
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcagccgaccagccttcgaaccagcacatccacaccctctacagcgaacaccac
ggttggcttcagggatggctgcatcgaaaactcggtaaccgctgcgacgcggccgacctg
gcccacgatacgttcctgcgcctgttgacccggcaagtcgtcaaaccctttggcagcgag
ccccgcgccttgctgacgcacatcgccaagggcctggtgatcgaccgctggcgacgtcag
gacatcgaacgcgcctatctggaaaccatcgctcaactgccggtcgccgaagtcccgtcg
ccggaaacccgcctgctgattctcgaaaccctgatgcgcatcgaagcgctgttgcgcgaa
ttgccgacagtcactcgcgacaccttcatgctgtcgcagatcgaggggctgacctacgcg
cagatcgctacacgcctgggtgtgtcgttgatcaccgtcaaacggcacatgcgcgccgcg
ttcattgcctgcctgagtgttgcctga
DBGET
integrated database retrieval system
