Pseudomonas hormoni: KJF94_17280
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Entry
KJF94_17280 CDS
T09556
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
phom
Pseudomonas hormoni
Brite
KEGG Orthology (KO) [BR:
phom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phom03000
]
KJF94_17280
Transcription factors [BR:
phom03000
]
Prokaryotic type
Helix-turn-helix
Other families
KJF94_17280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_lid_14
GAF
AAA_5
HTH_30
Mg_chelatase
AAA_2
HTH_1
HTH_7
AAA
HTH_28
HTH_22
Mga
HTH_23
HTH_20
HTH_29
DUF134
AAA_7
Diguanyl_cycl_sensor
HTH_11
PAS_9
HTH_17
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QVW21658
UniProt:
A0ABX8ESC3
LinkDB
All DBs
Position
complement(3720775..3722679)
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AA seq
634 aa
AA seq
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MTLIKTTSPKLHHEARLAREKLHLEGEVPDGVLRAEIDASWRRSLSHGVHFNSKHELTLE
SSASLDVLLSSNRLLIDAALPAIDYLAERQGKEGLIILANSDATILAVEGRADRLKGSGL
QDITLGACWSEAARGTNALGTALVEARPTMIDCGEHYLDRLTDFSCTSVPIYCPQGDILG
VLDLTREGPLGRVHDSTALLAMAVSQIESRVFNASFPDQIVLAFHSRRQYLESPWQGLLA
VSLGGQILAVSAQACQLLHAERSALVGRRCEEFLGVDGLQLLSRLHQGGVGSLQTAKGEF
FYKTLRAPQRSINVSTPPRSTAKTAKPQPDLDTLAGSNVRYARALRMARQGLANELPVLL
LGETGTGKEVIARALHMAGSRCDKPFVAVNCAAIPEGLIESELFGYREGAFTGSRRGGMV
GRLQQAHGGTLFLDEIGDMPLALQARLLRVLQDRKVAPLGAGEEQDIDVALICATHRDLK
RLVEEKHFREDLFYRVNGISVMLPALRERDDFSGLVSRLLAKLDAPTMVLHDDLNRLLAG
YHWPGNIRQLEMVLRTALAMREPGDTVLTLDHLPDSMLDELNASERPPSGSIRENELELI
RQSLDSHQGNVSAAADALGISRATLYRKLKQLRS
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgacgctaataaaaacaacttcccccaagctgcaccatgaagcccggctggcccgggaa
aaactccatctcgagggcgaagttcccgatggcgtgttgcgggcagaaatcgatgcgtcg
tggcgacgcagcctcagccatggcgtgcatttcaacagcaaacatgaactgacactggaa
tcgagcgcgagcctcgatgtgctgctgtcgagcaatcgcctgctgatcgacgcggcgttg
ccggccatcgattacctggccgagcgccagggtaaggaagggctgatcatcctcgccaat
tccgacgccaccatcctcgccgtcgaaggccgtgccgatcgtctcaagggcagtggcctg
caagacatcaccctcggggcctgctggagcgaagccgctcgcggtaccaacgcgctgggc
accgcactggtggaagcccggccgacaatgatcgattgcggcgagcattacctcgatcgc
ctgaccgatttctcctgcacctcggtgccgatttattgcccgcaaggcgacatcctcggc
gtcctcgacctgacccgcgaaggcccgctcggccgcgttcacgacagcaccgcgctgctg
gccatggccgtcagccagatcgaaagccgggtgttcaacgccagttttcccgaccagatc
gtcctggccttccacagccgtcggcaatacctcgaatccccttggcaaggcctgttggcg
gtgagtctcggcgggcagattctcgcggtcagcgcccaagcctgtcagttgctgcacgcc
gaacgctcggcattggtcggccgtcgttgcgaggagtttctcggcgtcgatggcttgcaa
ctgctgtcgcgtttgcatcagggcggggtcggcagtctgcagaccgccaaaggcgagttc
ttctacaaaaccctgcgcgcgccgcagcggtcgatcaacgtcagcacgccgccgcgcagc
accgccaaaaccgctaaaccgcaacccgatctcgacaccctggccggcagcaatgtccgc
tatgcccgcgccttgcgcatggcacgccaggggctggccaacgaattgccggtgttgctg
ctcggcgaaaccggcaccggcaaggaagtcattgcccgcgccttgcacatggccggcagt
cgttgcgacaaacccttcgtcgcggtgaactgcgcggcgattcccgaaggcctgatcgag
tcggaactgttcggctaccgcgaaggcgcattcaccggttcccgtcgaggcggcatggtc
gggcgtctgcaacaggctcacggcggcacgttgtttctcgacgaaatcggcgacatgccg
ctggccttgcaggcgcgtctgctgcgcgtcttgcaggaccgtaaagtcgcaccgctaggc
gccggcgaagaacaggacatcgacgtcgccctgatctgcgccacccaccgcgacctcaaa
cgcttggtcgaagaaaaacacttccgtgaagacctgttctatcgcgtcaacggcatcagc
gtgatgctgccggctctgcgcgagcgcgacgatttcagcgggctggtcagtcgactactg
gcaaaactcgacgcaccgaccatggtcctgcatgacgacttgaaccgcttgctcgcgggc
tatcactggccaggcaacatccgccaactggaaatggtgttgcgcaccgcgctggccatg
cgcgagccgggggatacggtgctcaccctcgaccacttgcccgacagcatgctcgacgaa
ctgaacgccagcgaacgccctccgtcgggcagtattcgcgaaaacgaactggagctgatt
cgccagtccctggacagccatcagggcaacgtgtcggccgccgccgacgccctgggtatc
agccgcgcgaccctgtatcgcaagctcaaacagttgcgctcgtga
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