Pseudomonas hormoni: KJF94_19880
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Entry
KJF94_19880 CDS
T09556
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
phom
Pseudomonas hormoni
Pathway
phom00061
Fatty acid biosynthesis
phom00071
Fatty acid degradation
phom01100
Metabolic pathways
phom01212
Fatty acid metabolism
phom02024
Quorum sensing
phom04146
Peroxisome
Module
phom_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
phom00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KJF94_19880 (fadD1)
00071 Fatty acid degradation
KJF94_19880 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KJF94_19880 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
KJF94_19880 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
phom01004
]
KJF94_19880 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phom04147
]
KJF94_19880 (fadD1)
Enzymes [BR:
phom01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KJF94_19880 (fadD1)
Lipid biosynthesis proteins [BR:
phom01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
KJF94_19880 (fadD1)
Exosome [BR:
phom04147
]
Exosomal proteins
Exosomal proteins of breast milk
KJF94_19880 (fadD1)
Exosomal proteins of breast cancer cells
KJF94_19880 (fadD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF599
Motif
Other DBs
NCBI-ProteinID:
QVW22122
UniProt:
A0ABX8ERC8
LinkDB
All DBs
Position
complement(4260561..4262258)
Genome browser
AA seq
565 aa
AA seq
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MIEDFWKDKYPAGIAADINPDEYPNIQAVLKQSCQRFADKPAFSNLGKTITYGELYELSG
AFAAYLQQHTDLQPGDRIAVQLPNVLQYPVAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAETVVPKTGVKHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYH
LPKSIKFNDVLSKGHGQPVAEANPASSDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCK
ALMGSNLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNEGFRKLDFSALKVTLSGGMALQLAAAERWKAVTGCAICEGYGM
TETSPVATVNPIQHIQIGTIGIPVPSTLCKVIDDAGVEQPLGEIGELCVKGPQVMKGYWQ
RQEATDEILDSEGWLKTGDIALIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLATLPG
VLQCAAIGVPDEKSGEAIKIFIVAKPGVTLTKEQVMEHMRANVTGYKVPRSVEFRDALPT
TNVGKILRRELRDEELKKIKAKNAA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagacttctggaaggataagtaccctgccgggattgctgccgacatcaatccg
gacgagtatccgaatattcaggcagtgctgaaacagtcctgccaacgcttcgccgacaaa
ccggcattcagcaacctgggcaagacaattacctacggtgaactgtacgaattgtccggt
gcctttgccgcttacctgcaacagcataccgacttgcagccgggcgatcgaatcgccgtg
cagctgcccaacgtcttgcagtacccggtcgctgtgttcggcgccattcgcgccgggctg
atcgtggtcaataccaacccgctgtacaccgcgcgggaaatggaacatcagttcaacgat
tccggtgccaaagccctggtgtgcctcgccaacatggcgcacctggccgagaccgtcgtg
ccgaaaaccggcgtcaagcatgtcatcgtcaccgaagtggctgacctgttgccgccgctc
aagcgcctgctgatcaacagcgtcatcaagtacgtgaagaagatggtcccggcgtatcac
ttgcccaagtccatcaagttcaacgacgtgttgagcaagggccatggccagccagtagct
gaagccaacccggccagcagcgacgtggctgtcctgcaatacaccggcggcaccaccggc
gtggcgaagggcgcaatgctgacccatcgcaacctcgtcgccaacatgctgcagtgcaag
gcgctgatgggttccaacctcaacgaaggctgcgagatcctgatcacgccgctgccgctg
taccacatctatgcgttcacctttcattgcatggcgatgatgctgatcggcaaccacaac
atcctgatcagcaacccgcgcgacctgccggcgatggtcaaggaactgtcgaagtggaag
ttcagcggcttcgtcggcctgaacacgctgttcgttgccctgtgcaacaacgaaggtttc
cgcaagctggatttctcggcgctgaaagtcaccctgtccggcggcatggccctgcaactg
gccgcggccgagcgctggaaagcggtcaccggttgcgccatctgcgaaggttatggcatg
accgaaaccagcccggtggcgacggtgaatccgatccagcacatccagatcggcaccatc
ggcattccggtgccttcgaccctgtgcaaagtcatcgacgatgccggcgtggaacagccg
ttgggcgaaatcggcgaactgtgcgtgaaaggtccgcaggtgatgaagggctactggcaa
cgtcaggaagccaccgatgaaatcctcgacagcgaaggctggttgaagaccggtgacatc
gcgttgatccagccggacggctacatgcgcattgtcgatcgcaagaaagacatgatcctg
gtctccggtttcaacgtgtacccgaacgagctggaagacgtattggcgaccctgccgggc
gtgctgcaatgcgcggccatcggcgtgccggacgagaagtcgggcgaggcgatcaagatt
ttcatcgtcgccaaaccgggcgtgaccctgaccaaggaacaggtgatggagcacatgcgc
gccaacgtcaccggctacaaggtgccgcgctcggtggagttccgtgatgcactgccgacc
accaacgtcggcaagatcctgcgtcgggaattgcgtgatgaagagctgaagaagatcaag
gcgaagaacgccgcataa
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