Pseudomonas hormoni: KJF94_20055
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Entry
KJF94_20055 CDS
T09556
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
phom
Pseudomonas hormoni
Pathway
phom03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KJF94_20055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phom03400
]
KJF94_20055
Enzymes [BR:
phom01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
KJF94_20055
DNA repair and recombination proteins [BR:
phom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KJF94_20055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Myb_DNA-binding_2
Motif
Other DBs
NCBI-ProteinID:
QVW22156
LinkDB
All DBs
Position
complement(4301792..4302655)
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AA seq
287 aa
AA seq
DB search
MRLLLEYQPPYDWPAMLGFLSARAVVGMETVLDGVYSRSIGLNGVHGTFSIKPVVGDALQ
VVLDFPDPSAVPEIVVRLRRMFDLDAHLPTIHRQLKTDPLMARLIAERPGLRVPGAWDGL
ELAIRAVLGQQITVSAAIRLAGKLVAQYGQPLASVLPGVTSVFPEASVLAEADLATLGMP
KSRGRTLSGVAQALLDDPLLFEPGREGGVARLLALHGIGDWTAQYIALRQLREMDAFPSG
DVGLINALAALEGGPLTARDLLRRAEAWRPFRGYAAQLLWTSLSRMD
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgaggttgttgctggagtaccagccgccctatgactggccggcgatgctgggttttttg
tcggcgcgggccgtggtcgggatggagacggtgctcgatggcgtgtattcgcgcagcatc
ggcttgaacggtgttcacggtacgttttcgatcaagccagtggtgggcgatgcgttgcaa
gtggtgctggattttcccgatccttcggcggtgccggagatcgttgtgcggctgcggcgg
atgtttgatctggatgcgcacctgccgacgatccatcggcagttgaagactgatccgttg
atggcgcggttgattgccgagcggccggggttgcgggttccgggggcgtgggacggtctg
gaactggcgatccgtgcggtgttgggtcagcagattacggtgagcgcggcgatccggttg
gcggggaaactggtggcgcagtatgggcagcctttggcgtctgttttgcccggtgtcacg
tctgtgtttcctgaagcgtccgttttggcggaggcggatctggcgacgctgggcatgccg
aaaagtcgtggccggacgttgtcgggtgtggctcaggcgttgcttgacgatccgttactg
tttgaaccggggcgtgagggcggtgtggcgcggttgctggcgttgcacgggattggcgac
tggacggcgcagtacattgcgttgcggcagttgcgggagatggatgcgtttccatcgggg
gatgtggggcttatcaatgcgctggcggcgcttgaaggtggaccgctgacggctcgggat
ttgttgcggcgggcagaggcttggcggccttttcgagggtatgcggcgcagttgctatgg
acatcgctgagccggatggattga
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