KEGG   Pseudomonas hormoni: KJF94_20470
Entry
KJF94_20470       CDS       T09556                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
phom  Pseudomonas hormoni
Pathway
phom02020  Two-component system
Brite
KEGG Orthology (KO) [BR:phom00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    KJF94_20470
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:phom02022]
    KJF94_20470
Two-component system [BR:phom02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   KJF94_20470
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_8 AAA Mg_chelatase FleQ MCM AAA_2
Other DBs
NCBI-ProteinID: QVW22233
LinkDB
Position
4390494..4391819
AA seq 441 aa
MLNSVMVVDDESSIRSAVEQWLSLSGFEVQLFSRADECLARLPAHYPGVILSDVRMPGMT
GLELLAEVQRRDADLPVILLTGHGDVPMAVDAMRDGAYDFLEKPFSPETLLGSLRRALDK
RRLVLENRALHEQADNRAKLDATLLGVSRGLQTLRRQVLDLAALPVNVLIRGETGSGKEL
VARCLHDFGPRAGKPFVALNCAAIPEQLFEAELFGHESGAFTGAQGKRIGKLEYADGGTL
FLDEIESMPLAQQVKLLRVLQEQKLERLGSNQSIRVDLRIIAATKPDLLDEARAGRFRED
LAYRLNVAELRLPPLRERREDIPLLFESFAQSAAERLGRTFPPLSGPQLSHLLSHDWPGN
VRELANVAERQVLGLGEPAPAGVDPGQSLAAQQEAFEAHCLRAALTRHKGDVKAVLEELQ
LPRRTFNEKMQRHGLSREMFL
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgctgaattcagtgatggtggtcgacgacgaaagcagcatccgcagcgccgtcgaacaa
tggctgagcctgtcgggtttcgaggtgcaactgttcagccgcgccgatgaatgcctggcg
cgactgccagcgcattaccccggcgtgatcctcagcgacgtgcgcatgcccggcatgacc
gggctggaactgctggccgaagttcagcgccgtgatgccgacttgccggtgattctgctg
accggccatggcgacgtgccgatggccgtcgatgcgatgcgcgatggcgcctacgacttt
ctcgaaaaacctttcagccctgaaaccctgcttggcagcctgcgccgtgcgctggacaag
cgccgactggtgctggaaaaccgcgccttgcatgagcaggccgacaaccgcgccaaactc
gacgcgacgctgctcggtgtgtcccgtggcctgcagaccctacgtcggcaagtgctggac
ctggcggcgttgccggtcaacgtgttgatccgtggtgaaaccggcagcggcaaggagctg
gttgcccgttgcctgcacgatttcgggccgcgcgccggcaagccgtttgtcgcgctcaat
tgcgcggcgattcccgaacagttgttcgaggccgagctgttcggtcacgagagcggcgcg
ttcaccggcgctcagggcaaacgcatcggcaagctcgaatacgccgatggcggcacgctg
tttctcgatgaaatcgaaagcatgccgctggcccagcaggtgaaattgttgcgggtgttg
caggaacagaagcttgagcggttgggttccaatcagagcattcgcgtggacttgcggatc
atcgctgcgaccaaacccgatctgctggatgaggcgcgggccgggcgttttcgcgaggat
ctggcctatcggctgaacgtcgccgagttgcgcttgccgccgttgcgtgagcggcgtgaa
gacattccgttgctgttcgagtcgtttgcgcaaagcgctgccgaacgattggggcgcaca
ttcccgccgctgagcggcccgcagttgagccatttgctgagccacgactggccgggcaat
gtgcgtgaactggcgaatgtggccgagcggcaggtgttggggctgggtgagcccgcacct
gcgggcgtcgatccggggcagtcgctggcagcgcagcaggaagcgtttgaagcgcattgc
ctgcgcgcggcgttgacccgacacaagggcgatgtgaaggcagtgcttgaagagctgcaa
ctgccgcgtcgtacgttcaatgaaaagatgcagcggcatgggttgagcagagagatgttt
ttgtag

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