Pseudomonas hormoni: KJF94_21085
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Entry
KJF94_21085 CDS
T09556
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
phom
Pseudomonas hormoni
Brite
KEGG Orthology (KO) [BR:
phom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phom03019
]
KJF94_21085 (rnc)
03009 Ribosome biogenesis [BR:
phom03009
]
KJF94_21085 (rnc)
03036 Chromosome and associated proteins [BR:
phom03036
]
KJF94_21085 (rnc)
Enzymes [BR:
phom01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
KJF94_21085 (rnc)
Messenger RNA biogenesis [BR:
phom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KJF94_21085 (rnc)
Ribosome biogenesis [BR:
phom03009
]
Eukaryotic type
90S particles
RNase
KJF94_21085 (rnc)
Prokaryotic type
rRNA processing factors
KJF94_21085 (rnc)
Chromosome and associated proteins [BR:
phom03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
KJF94_21085 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
QVW22349
LinkDB
All DBs
Position
complement(4538584..4539273)
Genome browser
AA seq
229 aa
AA seq
DB search
MSVSLSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFDRFP
LAREGQLSRLRARLVKGETLAVLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMDVARERVLAWLAGEFEGLTLVDTNKDPKTRLQEFLQSRGCELPRYEVVDIQG
EPHCRTFFVECEITLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtctccttaagccgtctagagcgtcagctcggctacaccttcaaggatcaggaa
ctgatggtcctggccctgactcaccgcagctttgccgggcgcaacaacgaacgcctggag
ttcctcggtgatgccatcctcaacttcgttgctggcgaggctttgttcgatcgcttcccg
ctggcccgcgaaggccagttgtcgcgattgcgcgcacgcctggtgaaaggtgagaccctg
gctgtgctggctcgaggtttcgatctgggcgagtacttgcgtctgggttccggcgagttg
aaaagcggcggtttccgtcgcgagtcgattctggccgatgccctggaagcgctgatcggt
gcgatctacctggacgcgggcatggacgtggcgcgcgagcgcgtgctggcctggctggcc
ggagagttcgaaggcctgacgctggtcgacaccaacaaagatccaaaaacccgcttgcag
gaatttctgcaatcgcgtggttgtgagctgccgcgttacgaagtggtggatatccagggt
gagccgcattgccggacgttcttcgtcgaatgtgaaatcaccttactgaatgaaaaaagc
cgaggtcagggtgtgagtcgtcgtattgccgaacaggtagcggccgccgcagcactgatt
gccctgggtgtggagaatggcaatgactga
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