Pseudomonas hormoni: KJF94_22400
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Entry
KJF94_22400 CDS
T09556
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
phom
Pseudomonas hormoni
Pathway
phom02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
phom00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KJF94_22400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
phom02022
]
KJF94_22400
02035 Bacterial motility proteins [BR:
phom02035
]
KJF94_22400
Two-component system [BR:
phom02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
KJF94_22400
Bacterial motility proteins [BR:
phom02035
]
Pilus system
Twitching motility proteins
KJF94_22400
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_50
HTH_30
Mg_chelatase
AAA_16
Pre_tape_measure
AAA_19
AAA_22
AAA
FliH
HTH_28
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QVW22581
UniProt:
A0ABX8ETU2
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All DBs
Position
4811919..4813250
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AA seq
443 aa
AA seq
DB search
MSPLQKVLIVDDEPDIRELLEITLGRMKLDTFSARNLGEAQALLKRETFDLCLTDMRLPD
GTGLELVQHIQQRYPQLPVAMITAYGNLETAINALKAGAFDFLTKPVDLTRLRALVTSAL
RMPAPGVTVDRRLLGDSLPMRNLRKQIDKLARSQAPVYISGESGSGKELVARLIHEQGSR
ANQPFIPVNCGAIPSELMESEFFGHRKGSFSGAIEDKPGLFQAAHGGTLFLDEVADLPLA
MQVKLLRAIQEKAVRSVGGQQETVVDVRILCATHKDLAAEVAAERFRQDLYYRLNVIELR
VPPLRERRDDIESLATHVLKRLAAGSGQPATKLHPQALEALKSYRFPGNVRELENMLERA
HTLCENKQIEASDLRLAEGNCTADSGVQDLTQIDNLEDYLDNVERKLILQALEETRWNRT
AAAQRLNLSFRSMRYRLKKFGLD
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagcccactgcaaaaagtcctgattgtcgacgacgaaccggatatccgcgaactcctg
gaaattaccctgggacgaatgaaactcgacaccttcagcgcccgcaaccttggcgaagcc
caggccctgttgaaacgcgaaacgttcgacctgtgcctgaccgacatgcgcctgccggac
ggcaccggccttgagctggtgcaacacattcagcaacgctatccccaactgccggtggcc
atgatcaccgcttacggcaacctcgaaacggcgatcaacgctctcaaggccggtgctttc
gacttcctgaccaaaccggtggacctcacccgcctgcgcgcactggtcaccagcgcactg
cgtatgcccgcgccgggcgtcaccgtcgatcgtcgtttgctgggcgactcgttgcccatg
cgcaatttgcgtaaacaaatcgacaagctggcccgcagtcaggcgccggtgtatatcagc
ggcgagtccggcagtggcaaggaactggtcgcccggctgatccatgaacaagggtcgcgc
gccaaccagccgtttatcccggtgaactgcggggcgatcccttcggaactgatggagagc
gaatttttcgggcatcgcaaaggcagcttcagcggcgccatcgaagacaagcccgggctg
ttccaggcagcccatggcggcacgctgttcctcgacgaagtggctgatttacctctggcg
atgcaagtcaaactgttgcgggcgattcaggaaaaggccgttcgcagcgtgggcgggcaa
caggaaaccgtggtggatgtgcgcatcctctgtgccacccacaaagacctcgccgccgaa
gtcgccgccgaacgctttcgccaggatctgtactaccgactcaacgttatcgaactacgg
gttccgcccttgcgcgaacgccgcgacgacatcgaatcgttggccactcatgtcctcaag
cgtctggcagccggcagcggccagcccgccacgaaactccacccgcaagcgcttgaagcg
ctgaaaagctatcgctttccgggcaacgtgcgagagctggagaacatgctcgaacgggct
cacaccttgtgcgaaaacaagcagatcgaagccagcgacctgcgactggccgaaggcaac
tgcaccgcagacagtggggtgcaggacctgacgcagatcgacaatctggaagactatctg
gacaacgtcgaacgcaaactcatcctccaggccctggaggaaacccgctggaaccgcacg
gcggcagctcagcggttaaatttgtcgtttcggtcgatgcgttacaggctgaagaagttc
gggttggattga
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