Pseudomonas hormoni: KJF94_23410
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Entry
KJF94_23410 CDS
T09556
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
phom
Pseudomonas hormoni
Pathway
phom03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KJF94_23410 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phom03400
]
KJF94_23410 (uvrA)
DNA repair and recombination proteins [BR:
phom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KJF94_23410 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KJF94_23410 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_16
BCA_ABC_TP_C
AAA_23
RsgA_GTPase
DnaJ_CXXCXGXG
nSTAND3
Viral_helicase1
cobW
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QVW22771
LinkDB
All DBs
Position
5030408..5033242
Genome browser
AA seq
944 aa
AA seq
DB search
MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGIPRC
PDHDIPLEAQTVSQMVDLVLAQPEGSKLMLLAPVIRERKGEHLSVFEELRAQGFVRARVN
GRICELDELPKLDKQKKHSIDVIVDRFKVRADLQQRLAESFETALKLADGIALVAPMDDE
PGEEIIFSARFACPICGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFDIKRLVNGELT
LAEGAIRGWDRRNVYYFQMLGSLASHYKFSLEVPFNDLPADQQKFILHGSGSQNVDFKYL
NDRGDIVKRSHPFEGIVPNLERRYRETESASVREELAKFLSTQPCPDCRGTRLRREARHV
WVGEKTLPAVTNLPIGDACEYFGVLKLTGRRGEIADKILKEIRERLQFLVNVGLDYLSLD
RSADTLSGGEAQRIRLASQIGAGLVGVLYILDEPSIGLHQRDNDRLLGTLKHLRDIGNTV
IVVEHDEDAIRLADYVVDIGPGAGVHGGHIVAEGTPAEVMAHPDSLTGKYLSGRVKIAVP
AKRTPRNKKLSLSLKGARGNNLRNVDLDIPIGLLTCVTGVSGSGKSTLINNTLFPLSATA
LNGATTLEASAHDSIKGLEHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPES
RSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCDVCKSKRYNRETLEIKYK
GKSIHETLEMTIEEARVFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLS
RELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADWL
VDLGPEGGSKGGQIIAVGTPEEVSEMKQSHTGFYLKPLLARDKA
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
ttggacaagatcctgattcgtggggcccgaacccacaacctgaagaacatcgacctgacc
ctgccacgggacaaactgatcgtcatcaccggcctgtccggatccggcaaatcgtccctg
gcattcgacacgctgtacgccgaaggccagcgccgctatgtcgaatcgctgtcggcctat
gcccggcagtttttgtcgatgatggaaaaacctgacgtcgacaccattgaaggcctgtcg
ccagccatttccatcgagcagaagtcgacctcgcataacccgcgctcgaccgtcggcacc
atcaccgaaatctacgactacctgcgcctgctttacgctcgcgtgggtattccgcgctgc
ccggatcacgacattccgctggaagcgcagactgtcagccagatggtcgacctggtcctc
gcgcaaccggagggcagcaagctgatgctgctggcgccggtgattcgcgagcgcaaaggt
gaacacctttcggtcttcgaagagctgcgcgcccagggctttgtacgggcccgggtcaac
ggcaggatctgcgagctggatgaactgccgaagctggataaacaaaagaagcattcgatt
gatgtaatagtcgaccgcttcaaggttcgcgccgacctgcaacagcgcctcgccgaatcg
ttcgagaccgcgctgaagctggcggacggcattgccctggttgcgccgatggacgatgag
ccgggtgaagaaatcatcttctccgcgcgcttcgcctgcccgatttgcggccatgccatc
agcgagctggaacccaaactgttctccttcaacaacccggccggcgcctgcccgacgtgc
gatggcctgggcgtgaagcagttcttcgacatcaagcgattggtcaatggcgaactgacc
ctggctgagggcgcgatccgcggctgggacaggcgcaacgtctattacttccagatgctc
gggtcgctggcgtcgcattacaagttcagcctcgaagtaccgttcaacgacctgccggcc
gatcagcagaaattcatcctgcacggcagcggctcgcaaaacgtcgatttcaagtacctg
aacgaccgtggcgacatcgtcaaacgctcgcacccgttcgaaggcatcgtaccgaacctg
gaacgtcgctaccgcgaaaccgaatcggcctccgtgcgcgaagagctggccaagttcctc
agtacccagccgtgcccggattgccgtggcacacgtctgcgtcgtgaggcgcggcatgtc
tgggtgggcgagaagactttgccggccgtcaccaatctgccgattggcgatgcgtgcgaa
tacttcggtgtgctgaagctgaccgggcgtcgcggtgaaattgccgacaagatcctcaag
gaaatccgcgagcgtctgcagttcctggtcaacgtcggcctcgactatctgtcgctggat
cgcagtgccgacacgttgtctggcggtgaagctcagcggattcgtctggccagtcagatc
ggcgccggtctggttggcgttctgtacatcctcgatgaaccgtcgattggtctgcaccaa
cgtgataacgatcgattgcttggcacgctcaagcacctgcgcgatatcggcaacacggtg
atcgtggtcgagcacgatgaagatgcgattcgcctggctgactatgtggtggatatcggc
ccgggtgctggcgtgcatggcgggcatatcgtcgccgaaggcacgccggccgaggtcatg
gctcacccagactcgctgaccggcaagtacttgtcgggccgggtgaagatcgccgtaccg
gccaaacgcacaccacgtaacaagaagttgtcgctgtccctcaagggcgctcgcggcaac
aacctgcgcaacgtcgatctggacattccgattggcctgctgacctgtgtcaccggcgtg
tctggctcgggcaaatcgacactgatcaacaacacactgtttccgttgagcgctaccgca
ctcaacggtgcaacgacgctggaagcatcggctcacgacagcatcaaaggactggagcat
ctggacaaggtcgtcgacatcgaccagagcccgatcggccgcaccccacgctccaacccg
gcgacgtacaccgggttgttcacaccgattcgcgagctgttcgccggcgtgccggaatca
cgttcgcgcggttacgggccggggcgtttctccttcaacgtgaagggcggacgctgcgag
gcctgtcagggcgatggtctgatcaaggttgaaatgcacttcctgccggacatctatgtt
ccgtgcgatgtctgcaagagcaagcgctacaaccgcgaaacgctggagatcaagtacaag
ggcaagagcatccatgaaaccctcgagatgaccatcgaggaagctcgggtgttcttcgac
gcggtgccggcactggcgcgcaagcttcagacgttgatggatgtcggcctgtcgtacatc
aagctcgggcaatcggcgaccacgctgtctggtggtgaagcgcagcgggtgaaactgtcc
cgcgaactgtccaagcgtgataccggcaagacgctctatattcttgatgagccaaccact
ggcctgcacttcgcggatatccagcaactgctcgacgtgctgcatcgtctgcgcgaccac
ggcaacaccgtggtggtgatcgagcacaatctggatgtgatcaagacggctgactggttg
gtggatcttgggccggaaggtggttccaagggcgggcagatcattgcggtcggtacgcct
gaagaagtctccgagatgaagcagtctcacaccggcttctacctcaagccgctgctggct
cgcgacaaggcctga
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