Pseudomonas hormoni: KJF94_24400
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Entry
KJF94_24400 CDS
T09556
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
phom
Pseudomonas hormoni
Brite
KEGG Orthology (KO) [BR:
phom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phom03009
]
KJF94_24400 (dbpA)
Enzymes [BR:
phom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KJF94_24400 (dbpA)
Ribosome biogenesis [BR:
phom03009
]
Prokaryotic type
rRNA helicases
KJF94_24400 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
PRAI
CMS1
ESX-1_EspG
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
QVW22955
LinkDB
All DBs
Position
5240764..5242149
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AA seq
461 aa
AA seq
DB search
MTTIATAFNTLPLSAAMLANLDSLGYAQMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAF
GIGLLNPINPRFFGCQALVICPTRELADQVAKELRRLARAEDNIKILTLCGGVAFGPQIG
SLEHGAHIIVGTPGRIQQHLRKGSLILHGLNTLILDEADRMLDMGFYDSIEEIIAQCPER
RQTLLFSATYPVGIKQLASKFMRNPQQVKAEAFHDDTQIEQRFYEISPEERMDAVVKVLA
HHRPASCVAFCFTKQQVQETVDHLTAKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVA
TDVAARGLDIDALDMVINVELARDSEIHIHRVGRTGRAGEKGIAISLVAPSEAHRAQAIE
QLQKSPLSWDQLDNLKSQGGGPLLPVMSTLVIGAGRKDKVRPGDILGALTGDAGIPGAQV
GKIAIFDFQAYVAVERGIAKQALQRLNDGKIKGRSLRVRIL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccatcgccaccgcttttaatactttgccgctgtccgccgccatgctggctaac
ctcgactccctcggttatgcccagatgacgccgatccaggcgcaaagcttgccggtgatc
ctgaaagggatggacctgatcgcccaggccaagaccggcagcggcaagaccgccgccttc
ggtatcggcctgctgaacccgatcaatccgcgcttcttcggttgccaggcgctggtcatt
tgcccgacgcgcgagctggcggaccaggtcgccaaggaactccgtcgtctggcccgcgcc
gaagacaacatcaagatcctgaccctgtgcggcggcgtcgcgttcggcccgcagatcggt
tcgctggagcatggcgcgcacatcatcgtcggcaccccgggtcgtatccagcagcacttg
cgcaagggttcgctgatccttcatggcctgaacacgctgatcctcgacgaagccgaccgc
atgctcgacatgggtttctacgactccatcgaagaaatcattgcccagtgccccgagcgt
cgccagaccctgctgttctccgccacgtatccggtgggcatcaagcagctcgcttcgaag
ttcatgcgcaacccgcagcaagtgaaggccgaggcgttccacgacgacacgcagatcgag
cagcgcttctacgagatttccccggaagagcgcatggatgccgtggtcaaagtcctcgcg
catcaccgtccggcgtcctgcgtcgccttctgcttcaccaagcagcaggttcaggaaacc
gttgaccacctgacggccaaaggcatctccgccgtcggcctgcacggcgatctggaacag
cgtgaccgtgaccaggtgctagcaatgttcgccaaccgcagcacgtcagtgctggtcgcc
accgacgtcgccgcgcgcggtctggacatcgatgcgctggacatggtgatcaacgtcgaa
ctggcccgtgattcggaaatccacattcaccgcgttggccgtaccggccgtgcgggtgag
aaaggtattgcgatcagcctggtcgccccgtccgaagcgcaccgcgcccaggccatcgag
caactgcagaagtcgccgttgagctgggatcagctggacaacctcaaatcccagggtggc
ggaccgttgctgccggtgatgagtacgctggtcatcggcgcgggccgtaaagacaaggtt
cgcccgggtgacatcctcggcgcactgaccggcgatgccgggattccgggtgcgcaggtt
ggcaagattgcgattttcgacttccaggcctacgtggctgttgaacgcgggatcgccaag
caagccttgcagcgcctgaatgacggcaagatcaaaggccgttcgttgcgcgttcgcatc
ctgtaa
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