Pseudomonas hormoni: KJF94_25580
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Entry
KJF94_25580 CDS
T09556
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
phom
Pseudomonas hormoni
Pathway
phom00300
Lysine biosynthesis
phom00470
D-Amino acid metabolism
phom01100
Metabolic pathways
phom01110
Biosynthesis of secondary metabolites
phom01120
Microbial metabolism in diverse environments
phom01230
Biosynthesis of amino acids
Module
phom_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
phom00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KJF94_25580 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KJF94_25580 (lysA)
Enzymes [BR:
phom01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KJF94_25580 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QVW23181
UniProt:
A0ABX8EVJ5
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Position
5489374..5490621
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AA seq
415 aa
AA seq
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MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYLAYADALAGMPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGSPDKIVFSGVGKTRDDMRRALEVGVH
CFNVESTDELERLQVIAAELGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYVRAAQLPNLEVVGVDCHIGSQLTTLPPFIDALDRLLGLVDRLGDCGIYLRHIDLGGGL
GVRYRDEEPPLAADYIKAVRERLDGRDLALVFEPGRFIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVTAVRPRATAARAYDIVGPICETGDFLAKDRELALEEGD
LLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGDQAVEVRRRETVAELFAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttaactaccgtgacggtgagctgttcgcggaaggtgttgccctgtccgcc
atcgccgaacgctttggcacaccgacctacgtctactcccgcgcccacatcgaagcccag
tacctggcgtacgccgatgcgttggccggcatgccgcacctggtctgcttcgcggtcaag
gccaactccaacctgggtgttctgaatgtcctggcgcgtctgggcgccggttttgacatc
gtctcccgtggcgagctggaacgcgttctggccgccggcggcagccccgacaagatcgtg
ttctccggcgtcggcaagacccgtgatgacatgcgccgtgctctggaagtcggcgttcat
tgcttcaacgtcgaatccaccgacgagctggagcgcctgcaagtgatcgccgccgagctg
ggcgttcgcgcaccgatctcgctgcgcgtgaacccggacgtcgatgccggcacgcacccg
tacatttccaccggtctcaaagagaacaagttcggcatcgccattgccgacgccgaagac
gtgtacgtccgcgccgcgcaactgccaaacctggaagtggtcggcgtcgattgccacatc
ggatcgcaactgaccaccctgccgccgttcatcgacgccctcgaccgcctgctgggcctg
gtcgaccgcctcggcgattgcggcatctacctgcgccacatcgatctcggtggtggcctg
ggcgtacgttatcgcgatgaagagccgccgctggccgccgactacatcaaggctgtgcgc
gagcgtctcgacggtcgtgacctggcgctggtgttcgagccgggccgcttcatcgtcgcc
aacgctggcgtgctgctgacccaggtcgagtacctcaagcacaccgaacacaaagacttc
gccatcgtcgacgcggccatgaacgacctgattcgtccggcgctgtaccaggcctggatg
gacgtcaccgccgtgcgccctcgcgcgaccgccgctcgtgcctacgacatcgtcgggccg
atctgcgagaccggcgatttcctggccaaggatcgtgaattggccctggaagaaggcgac
cttctggccgtgcattcggccggtgcttatgggtttgtcatgagttccaactacaacacc
cgcggccgtgccgccgaagtgttggtggacggtgatcaggcagttgaagtgcgtcgccgt
gagacggtagccgagttgtttgctggcgaaagcctgctgccggagtaa
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