Pseudomonas hormoni: KJF94_25585
Help
Entry
KJF94_25585 CDS
T09556
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
phom
Pseudomonas hormoni
Pathway
phom00300
Lysine biosynthesis
phom00470
D-Amino acid metabolism
phom01100
Metabolic pathways
phom01110
Biosynthesis of secondary metabolites
phom01120
Microbial metabolism in diverse environments
phom01230
Biosynthesis of amino acids
Module
phom_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
phom00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KJF94_25585 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KJF94_25585 (dapF)
Enzymes [BR:
phom01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KJF94_25585 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QVW23182
UniProt:
A0ABX8EWX9
LinkDB
All DBs
Position
5490626..5491456
Genome browser
AA seq
276 aa
AA seq
DB search
MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLIVEAPSNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGIIELDIRSDGQISVDM
GAPRLVPADIPFVADSQALSYSLDVDGAAVELAAVSMGNPHAVLRVTDINNAPVHELGPK
IEHHPRFPARVNVGFLQVIDRNRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVLMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcacggcctgggcaatgacttcatggtcctcgacctg
gtcagccagcacgcgcacatcctgcccaagcacgccaagcaatggggcgaccggcacacc
ggcatcggtttcgaccagttgttgatcgtcgaagcgccgagcaacccggatgtggacttc
cgttatcggatcttcaactccgacggctccgaagtggaacagtgcggcaacggtgcgcgc
tgtttcgcccgttttgtgctcgacaagcgcctgaccgcaaaacggcagattcgcgtcgaa
accaaaagtggcattatcgagctggatatccgcagcgacggccagatcagcgtcgacatg
ggcgcaccgcgcctggtgccggccgacatcccgttcgttgccgacagtcaggcactgagc
tactcgctcgacgtcgacggcgcagcggttgaactggccgccgtgtcgatgggcaacccg
catgcggtgttgcgcgtcacggatatcaacaacgcaccggtgcatgaactggggccgaaa
atcgaacatcacccgcgcttccctgcacgggtcaatgtcggctttctccaggtcatcgac
cggaaccgcgcgcagctgcgcgtctgggaacgtggcgccggggaaacccaggcctgcggc
accggcgcctgtgctgctgcagtggccgcgatcagccaggggtggatggattcgccgcta
ttgatcgacctgcccggcgggcgtctgtccattgaatgggcaggcccaggccaaccggtc
ttgatgaccggcccggcagtccgtgtttacgaaggacaagtacgtctttga
DBGET
integrated database retrieval system