Pseudomonas hormoni: KJF94_25965
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Entry
KJF94_25965 CDS
T09556
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
phom
Pseudomonas hormoni
Pathway
phom02025
Biofilm formation - Pseudomonas aeruginosa
phom03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
phom00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KJF94_25965 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KJF94_25965 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
phom02044
]
KJF94_25965 (tssH)
Secretion system [BR:
phom02044
]
Type VI secretion system
Imp/Vas secretion system core components
KJF94_25965 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_22
AAA_16
Clp_N
NACHT
AAA_7
TniB
nSTAND3
Sigma54_activat
NBD_SMAX1
AAA_24
AAA_30
Hpr_kinase_C
AAA_25
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QVW23255
LinkDB
All DBs
Position
complement(5573183..5575831)
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AA seq
882 aa
AA seq
DB search
MINVDLQQLIQALDAETRRDLESSAERCVARGGSKILVEDLLLGLLERPQGLLARALQDA
EVDAGELSAALQSRVEHSASRNPVFAPELVQWLQDALLVANLELGQSQVEQAALILALLR
NPMRYAGSRYQSLLAKLNIERLKEFALSQKEQPATGKPAVPGESLLERFTHNLTQQARDG
KLDPVLCRDGAIRQMVDILARRRKNNPIVVGEAGVGKTAIVEGLASRIAAGEVPQVLKGV
ELLSLDMGLLQAGASVKGEFERRLKGVIDEVKASPKPIILFIDEAHTLIGAGGNAGGSDA
ANLLKPALARGELRTIAATTWAEYKKYFEKDPALARRFQPVQLHEPTVSEAVTILRGLAQ
VYEKSHGIYLRDDAVVAAAELSARYLAGRQLPDKAVDVLDTACARVRISLAAAPESLERL
RGELAEGGRQRQALRRDAEAGLLIDHEALDALEDRLAAAEDEMVALETLWTEQKELAERL
LDLRQLLAKAREAAAVEPIVTVEEDAEGTVIETLAVDEAQSVETLEAALNETHKALTELQ
VKERLVSFEVCPRLVAEVISAWTGVPLAQLAREHNAKVASFATDLRTRIRGQEQAVHALD
RSMRATAAGLNKPDAPVGVFLLVGPSGVGKTETALALADLLYGGDRFITTINMSEFQEKH
TVSRLIGAPPGYVGYGEGGMLTEAVRQKPYSVVLLDEVEKADPDVLNLFYQIFDKGVAND
GEGREIDFRNTLILMTSNLGSDRISELCENGARPTAEVLEETIRPVLSKHFKPALLARMR
VVPYYPVGGPVLRELIEIKLGRLGERLNRRQLDFSYSQDLVDHLAERCTQSDSGARLIDH
LLDLHVLPLVADRLLDAMATGESLKRVHATLDGGASVTCEFA
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgtagacctgcaacaacttatccaggcgctggacgccgaaacccgccgtgat
ctggaaagttctgccgaacgctgcgtcgcccgtggcggcagcaagatcctcgtcgaagac
ttgctgctgggcctgctggagcgcccgcaaggcctgctcgcacgcgcgctgcaagacgcc
gaagtggatgccggcgagctgagcgccgcgttgcaatcgcgggtcgagcacagcgcctcg
cgcaatccggtgtttgccccggaactggtgcagtggctgcaggatgcgttgctggtggcc
aaccttgaactgggccagagccaggtcgagcaagccgcgttgatcctcgcgctgctgcgc
aacccgatgcgctacgcgggcagccgctatcagtcgttgctggccaagctgaacatcgag
cgcctgaaagaatttgccttgtcgcagaaagagcaaccggccaccggcaaaccggccgtg
ccgggggagtcgctgctggagcgcttcacccacaacctgacgcaacaggcccgcgacggc
aaactcgacccagtgctgtgccgcgacggcgcgatccggcagatggtcgacatcctcgcc
cgtcgccgcaagaacaatccgattgtggtcggtgaagccggcgtcggtaaaaccgcgatc
gtcgaaggcctggcgtcgcgcattgcggctggtgaagtgccgcaagtgttgaaaggcgtg
gagctgctgtcgctggacatgggcctgttgcaggccggcgccagcgtcaaaggtgagttc
gaacgtcgcctcaaaggcgtgatcgacgaagtcaaagcgtcgccgaaaccgatcatcctg
ttcatcgacgaagctcacacgctgatcggcgcgggtggcaacgccggcggttccgatgcg
gccaacctgctcaaaccagccttggcccgtggcgagttgcgcaccatcgccgctaccacc
tgggcggagtacaagaagtacttcgaaaaagacccggcgctggcccgtcgtttccaaccg
gtgcaactgcacgaaccgaccgtcagcgaagcggtgacgatcctccgtggcctggctcag
gtttacgagaagagccacggcatctacctgcgcgatgacgcagtggtggcggcggccgaa
ttgtccgcccgttacctcgcgggtcgtcagttgccggacaaagccgtcgacgtgctcgac
actgcgtgcgcccgcgtacgcatcagcctcgccgccgcgccggaaagccttgagcgcctg
cgtggcgaactagctgaagggggccgtcagcgccaggcgttgcgtcgtgatgctgaagct
ggtttgctgatcgatcacgaagcgctggacgctctggaagatcgtctggccgctgccgaa
gatgaaatggtcgccctcgaaacgctgtggaccgagcagaaagaactggccgagcgcttg
ctggatctgcgtcagctactggccaaggcccgcgaagcggcagccgtagagccaatcgtt
acggttgaagaagacgccgaaggcaccgtgatcgaaacgctggcggtggacgaagcgcaa
agcgtcgagaccctggaagccgcgctcaacgaaactcacaaagccctgaccgagctgcag
gtcaaagaacgcctggtgagcttcgaagtctgcccgcgcctggtcgccgaagtgatcagc
gcctggaccggcgtgccattggcgcaactggcccgcgaacacaacgccaaggtcgccagt
ttcgccaccgacctgcgcactcgcatccgtggtcaggaacaagccgttcacgcactggac
cgctcgatgcgcgccaccgctgccggcctgaataaaccggatgcaccggtcggcgtgttc
ctgctggtcggcccgagcggcgtcggcaagaccgaaaccgcgctggccctcgcagacttg
ctgtacggcggcgatcgtttcatcaccaccatcaacatgtccgagttccaggagaagcac
accgtctcgcgcctgatcggtgcgccgccgggttacgtcggttacggcgagggcggcatg
ctcaccgaagccgtgcgtcaaaagccgtactcggtcgtgctgctcgatgaagtcgagaag
gccgacccggatgtgctcaatctgttctaccaaatcttcgacaaaggcgtggccaacgac
ggcgaaggacgcgagatcgacttccgcaacacgctgatcctgatgacctcgaacctgggc
agcgaccgcatcagcgaactctgcgaaaacggcgcgcggccgactgctgaagtgctcgaa
gaaaccattcgcccggtgctgagcaaacacttcaagccggcgctgctggcgcgcatgcgt
gtggtgccttactacccggttggcggtccggtgctgcgcgagctgatcgaaatcaaactc
ggtcgtctgggcgagcgcctgaaccgtcgtcagctggatttcagctactcgcaagacctc
gtcgatcacctggccgaacgctgcacccaaagcgacagcggtgcgcgtctgatcgaccac
ttgcttgacctgcacgtgctgccgctggtggctgaccgcttgctcgatgcgatggccacc
ggggaaagcctcaagcgtgtccacgcgacgctcgacggcggtgccagcgtgacctgcgag
ttcgcctga
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