KEGG   Pseudomonas hormoni: KJF94_26015
Entry
KJF94_26015       CDS       T09556                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
phom  Pseudomonas hormoni
Pathway
phom02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:phom00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    KJF94_26015 (tssC)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:phom02044]
    KJF94_26015 (tssC)
Secretion system [BR:phom02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   KJF94_26015 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 VMAP-M0
Other DBs
NCBI-ProteinID: QVW23263
LinkDB
Position
complement(5582543..5584018)
AA seq 491 aa
MSTSAAQQKSKESGEYSILDSIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNNGEPVK
KAMVDRMIAEIDAKLSRQMDEILHHPDFQSLESSWRGLQLLVDRTNFRENIKIEILNVSK
EDLLDDFEDSPEVMQAGLYKHIYTAEYGQFGGQPVGAIIANYFMSPSSPDVKLMQYVSSV
ACMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDSRYVGLTVP
RFLLRNPYDPEENPVKSFVYKETVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIGP
QSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSA
SSVQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAAQIIVSDVEGEPGWYRVSLNVRPHFKYMGADF
TLSLVGKLDKE
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgagcacaagtgcagcgcagcaaaagagtaaagagagcggcgaatacagcattctcgac
agcatcatcgccgaaacccgcctgaccccggacgacgaagcctacgacattgccaagcgc
ggtgtgtcggccttcatcgaagagctgctcaagccgcagaacaatggtgagccggtcaag
aaagccatggttgaccgcatgatcgccgagatcgatgccaagctcagccgtcagatggac
gaaatcctccaccacccggacttccagtccctggaatcgtcgtggcgtggtctgcagttg
ctggtcgaccgcaccaacttccgcgaaaacatcaagatcgaaatcctcaacgtctccaaa
gaagacctgctggacgatttcgaagattcgccggaagtgatgcaggctggcctgtacaag
cacatctacaccgctgaatacggccagttcggtggtcagcctgtgggcgcgatcatcgcc
aactacttcatgtccccaagctcgccggacgtgaaactgatgcagtacgtgtccagcgtc
gcctgcatgtcccacgcgccgttcattgccgcggcgggcccgaaattctttggcctggaa
agcttcaccggcctgccggacctcaaggatctgaaagatcacttcgaaggcccgcaattc
gccaaatggcagagcttccgccagtcggaagactcccgttacgttggcctgaccgtgccg
cgtttcctgctgcgtaacccgtacgacccggaagaaaacccggtcaaatcgttcgtgtac
aaggaaaccgtcgccaacagccacgagcactacctgtggggcaacactgcctacgcgttc
ggcaccaagctgaccgacagcttcgccaaattccgctggtgcccgaacatcatcggcccg
caaagcggtggcgcggttgaagacctgccgttgcaccacttcgaaagcatgggcgaaatc
gaaaccaagattcctaccgaggttctggttagcgaccgtcgtgaatacgaactggctgag
gaaggcttcatctccctgaccatgcgcaaaggttccgacaacgcggcgttcttctccgcg
agctcggtgcagaagccgaagttcttcggcatcagcgcagaaggcaaggcggcagagctg
aactacaagctcggcacccaactgccgtacatgatgatcgtcaaccgcctggctcactac
ttgaaagtgctgcagcgcgagcaactcggttcgtggaaagaacgcaccgacctcgagctg
gaactgaacaagtggatccgccagtacgtggccgaccaggaaaacccgagcgccgaagtc
cgtggccgtcgtccactgcgcgctgcccagatcatcgtcagcgatgtcgaaggcgagcct
ggctggtaccgcgtcagcctgaacgtgcgcccgcacttcaagtacatgggtgccgatttc
accctgtcgctggttggcaagctggacaaagagtaa

DBGET integrated database retrieval system