Pseudomonas hormoni: KJF94_26015
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Entry
KJF94_26015 CDS
T09556
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
phom
Pseudomonas hormoni
Pathway
phom02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
phom00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KJF94_26015 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
phom02044
]
KJF94_26015 (tssC)
Secretion system [BR:
phom02044
]
Type VI secretion system
Imp/Vas secretion system core components
KJF94_26015 (tssC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
QVW23263
LinkDB
All DBs
Position
complement(5582543..5584018)
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AA seq
491 aa
AA seq
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MSTSAAQQKSKESGEYSILDSIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNNGEPVK
KAMVDRMIAEIDAKLSRQMDEILHHPDFQSLESSWRGLQLLVDRTNFRENIKIEILNVSK
EDLLDDFEDSPEVMQAGLYKHIYTAEYGQFGGQPVGAIIANYFMSPSSPDVKLMQYVSSV
ACMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDSRYVGLTVP
RFLLRNPYDPEENPVKSFVYKETVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIGP
QSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSA
SSVQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAAQIIVSDVEGEPGWYRVSLNVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaagtgcagcgcagcaaaagagtaaagagagcggcgaatacagcattctcgac
agcatcatcgccgaaacccgcctgaccccggacgacgaagcctacgacattgccaagcgc
ggtgtgtcggccttcatcgaagagctgctcaagccgcagaacaatggtgagccggtcaag
aaagccatggttgaccgcatgatcgccgagatcgatgccaagctcagccgtcagatggac
gaaatcctccaccacccggacttccagtccctggaatcgtcgtggcgtggtctgcagttg
ctggtcgaccgcaccaacttccgcgaaaacatcaagatcgaaatcctcaacgtctccaaa
gaagacctgctggacgatttcgaagattcgccggaagtgatgcaggctggcctgtacaag
cacatctacaccgctgaatacggccagttcggtggtcagcctgtgggcgcgatcatcgcc
aactacttcatgtccccaagctcgccggacgtgaaactgatgcagtacgtgtccagcgtc
gcctgcatgtcccacgcgccgttcattgccgcggcgggcccgaaattctttggcctggaa
agcttcaccggcctgccggacctcaaggatctgaaagatcacttcgaaggcccgcaattc
gccaaatggcagagcttccgccagtcggaagactcccgttacgttggcctgaccgtgccg
cgtttcctgctgcgtaacccgtacgacccggaagaaaacccggtcaaatcgttcgtgtac
aaggaaaccgtcgccaacagccacgagcactacctgtggggcaacactgcctacgcgttc
ggcaccaagctgaccgacagcttcgccaaattccgctggtgcccgaacatcatcggcccg
caaagcggtggcgcggttgaagacctgccgttgcaccacttcgaaagcatgggcgaaatc
gaaaccaagattcctaccgaggttctggttagcgaccgtcgtgaatacgaactggctgag
gaaggcttcatctccctgaccatgcgcaaaggttccgacaacgcggcgttcttctccgcg
agctcggtgcagaagccgaagttcttcggcatcagcgcagaaggcaaggcggcagagctg
aactacaagctcggcacccaactgccgtacatgatgatcgtcaaccgcctggctcactac
ttgaaagtgctgcagcgcgagcaactcggttcgtggaaagaacgcaccgacctcgagctg
gaactgaacaagtggatccgccagtacgtggccgaccaggaaaacccgagcgccgaagtc
cgtggccgtcgtccactgcgcgctgcccagatcatcgtcagcgatgtcgaaggcgagcct
ggctggtaccgcgtcagcctgaacgtgcgcccgcacttcaagtacatgggtgccgatttc
accctgtcgctggttggcaagctggacaaagagtaa
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