Pseudomonas hormoni: KJF94_26285
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Entry
KJF94_26285 CDS
T09556
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
phom
Pseudomonas hormoni
Pathway
phom03420
Nucleotide excision repair
phom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KJF94_26285 (uvrD)
03430 Mismatch repair
KJF94_26285 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phom03400
]
KJF94_26285 (uvrD)
Enzymes [BR:
phom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KJF94_26285 (uvrD)
DNA repair and recombination proteins [BR:
phom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KJF94_26285 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
KJF94_26285 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_12
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QVW23314
LinkDB
All DBs
Position
5649466..5651649
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAASVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLMGINPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYE
AACLRAGVIDFSELLLRALDLWRDHPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIYQYSDDFPDAETIRLEQNYRSTAGILKAANALIA
NNTGRMGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPARGI
GEKTVEAIRDHARHSDVSMWEAMRLLVANKGLTGRAAGALGAFIELIENLAAKCVEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARNFENSEEDEDLTPLAAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
QQSSSSLFGGSEIPDTGFSLGQAVRHSVFGDGVILNFEGAGAQARVQVNFSEGSKWLMLG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctcccttctgctgaactccctcaacgatgcccaacgccaggccgta
gctgcctccgtgggtcgtcagttggtcctggccggtgctggttccggtaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgaaaacgcctcgccccactcaatcctg
tcggtgacattcaccaacaaggccgctgccgagatgcgtcatcgcatcgagcagctgatg
ggtatcaacccggccggcatgtgggtcggcaccttccacggcctggcgcaccgcttgctg
cgggcgcactggcaggaagccggcctgagccagaccttccagattctcgacagcgacgac
cagcaacgactggttaaacgcgtgatccgcgagttggggctggacgagcaacgctggccg
gcccgtcaggcccagtggtttatcaacgggcagaaagacgaaggtctgcgcccgcaacat
attcaagccagcggcgatctgttcctggccaccatgcgtagcatttacgaagcctatgag
gccgcgtgcctgcgcgccggcgtcatcgacttttccgaattgctgctgcgcgccctcgat
ctgtggcgcgatcaccctgggctgctggcgcactatcagaagcgcttccggcacattctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggttgcgtctactggccaag
ggcggcgacagcctgatggtggtcggcgacgacgatcagtcgatctacggctggcgcggc
gcgaaaatcgagaacatctatcagtactccgacgatttcccggacgccgagaccatccgc
ctggagcagaactaccgttccaccgccgggattctcaaggctgccaacgccctgatcgcc
aataacaccgggcgcatgggcaaagagctgtggaccgacggtggcgaaggcgaagcgatc
aatctgtacgccgcgttcaacgaacacgacgaagctcgttatgtggtggaaaccattgaa
agcgcgctgaaaaccggcctggctcgcagcgatatcgcgattttgtaccgctcgaacgcc
caatcgcgcgttttggaagaagccttgctgcgtgagcgcattccgtaccgcatctatggt
ggtcagcgtttcttcgaacgagctgaaatcaagaacgccatggcttacctgcgtttgctg
gaaggccgtggcaacgatgcagcgctggagcgggtgatcaacgttccggcccgtggcatc
ggcgagaaaaccgttgaagcgattcgcgaccatgcgcgccacagcgatgtgtcgatgtgg
gaagcgatgcgcttgctggtcgcgaataaagggctgaccggccgtgccgccggcgcgctt
ggtgcgtttattgagctgatcgagaacctcgccgccaagtgcgtggaaatgccgctgcac
ttgatgacccagaccgtcatcgagcagtccggactgattgcctaccacgaagcggaaaaa
ggcgagaaaggccaggcacgggtagaaaaccttgaggaactggtcagcgccgcgcgcaac
ttcgaaaactcggaagaggatgaagacctgacgccactggcggcgttcctcggccacgcg
tcgctggaggctggcgatactcaggccgacgagcacgaagacagcattcagttgatgacc
ttgcacagcgccaagggcctggaattcccttacgtgttcctggtgggcatggaagaaggg
ctgttcccgcacaagatgagcctggaagagccgggacgtcttgaagaggaacgtcgtttg
gcctatgtcggtatcacccgcgccatgcagaacctggtgatgacctatgctgaaacccga
cgcctgtatggcagtgagacctacaacaaggtgtcgcgtttcgtacgtgaagtaccgaaa
ggcctgatccaggaagtgcggctgtccaacagcgtcagccgtccgtttggcggcggtcag
cagcagagttccagcagcctgttcggcggtagtgaaattccggacaccggattcagcctc
ggccaggccgttcggcattcggtgttcggcgacggcgtgatcctgaacttcgaaggcgcc
ggggctcaggcccgggtgcaggtgaacttcagcgaaggcagcaagtggctgatgctgggt
tacgcgaagctggaagcgatctaa
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