Pseudomonas hormoni: KJF94_26585
Help
Entry
KJF94_26585 CDS
T09556
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
phom
Pseudomonas hormoni
Brite
KEGG Orthology (KO) [BR:
phom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phom03032
]
KJF94_26585 (gyrB)
03400 DNA repair and recombination proteins [BR:
phom03400
]
KJF94_26585 (gyrB)
Enzymes [BR:
phom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KJF94_26585 (gyrB)
DNA replication proteins [BR:
phom03032
]
Prokaryotic type
DNA Topoisomerases
KJF94_26585 (gyrB)
DNA repair and recombination proteins [BR:
phom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KJF94_26585 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QVW23373
LinkDB
All DBs
Position
5713101..5715518
Genome browser
AA seq
805 aa
AA seq
DB search
MSEENTYDSTSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDD
ISIIIHPDESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GVSVVNALSKELILTVRRSGKIWEQTYVHGVPQEPMKIVGESETTGTQIHFKPSADTFKN
IHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEELFKYEGGLRAFVEYLNTNKTPVNQV
FHFNIQREDGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNTYIEA
EGLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSD
FLLENPNEAKLVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE
LYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIG
RDEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKK
GKQEQYIKDDDAMEEYMTQSALEDASLHLNEEAPGISGEALERLVNDFRLVMKTLKRLSR
LYPQELTEHFIYLPAVSMEQLSDHAAMQDWLAKYEVRLRTVEKSGLVYKASLREDRERNV
WLPEVELISHGLSNYVTFNRDFFGSNDYKTVVSLGAQLSSLLDEGAYIQRGERKKPVTEF
KEALEWLMTESTKRHTIQRYKGLGEMNPDQLWETTMDPSQRRMLKVTIEDAIGADQIFNT
LMGDAVEPRRDFIESNALAVSNLDF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaagaaaatacgtacgactcaacgagcattaaagtgctgaaaggcctggatgcc
gtacgcaaacgtcccggtatgtacattggtgacaccgacgatggcagcggtctgcaccac
atggtgttcgaggtggtcgataactcgatcgacgaagctttggccggccattgcgacgac
atcagcatcatcatccacccggacgaatccatcaccgttcgcgacaacggtcgtggcatc
ccggtagacgtgcacaaagaagaaggcgtttcggcagccgaggtcatcatgaccgtgctg
cacgccggcggtaagttcgacgacaactcctacaaagtatccggcggtctgcacggtgtg
ggtgtgtctgtagtgaacgcactgtccaaagaactgatcctgacggttcgccgtagcggc
aagatctgggagcagacttacgtccacggtgttccgcaagagccgatgaaaatcgttggc
gaaagcgaaaccaccggcacccagattcacttcaagccttcggctgacaccttcaaaaac
atccacttcagctgggatatcctggccaagcggattcgtgaactgtctttcctcaactcc
ggtgttggtatcgtcctcaaggacgagcgcagcggcaaggaagagttgttcaagtacgaa
ggtggcttgcgtgcgttcgttgaatacctgaacaccaacaagactccagtcaaccaggtg
ttccacttcaacatccagcgtgaagacggcatcggcgtggaaatcgccttgcagtggaac
gacagcttcaacgagaacttgttgtgcttcaccaacaacattcctcagcgcgatgggggt
actcacctggtgggtttccgttccgccctgactcgtaacctgaacacctacatcgaagct
gaaggcctggccaaaaagcacaaggttgccaccaccggtgatgacgcccgtgaaggcttg
accgcgatcatctcggtgaaggtgccggatccgaagttcagctcccagaccaaagacaag
ctggtgtcttccgaagtgaagaccgcggtcgaacaggaaatgggcaagtacttctccgac
ttcctgttggaaaacccgaacgaagccaaactggtcgtcggcaagatgatcgacgcggca
cgtgcccgtgaagcagcgcgtaaagcgcgcgagatgacccgccgtaaaggcgcgctggat
atcgccggcctgccgggcaaactggctgactgccaggaaaaagaccctgccctctccgaa
ctgtacctcgtggaaggtgactctgctggcggttccgccaagcagggacgcaaccgtcgg
acccaggccattctgccgctgaaaggcaagatcctgaacgtcgagaaggcacgcttcgac
aagatgatctcttcgcaagaagtgggcaccttgatcactgcactgggctgcggcatcggc
cgcgacgagtacaacatcgacaagctgcgctatcacaacatcatcatcatgaccgatgct
gacgtcgacggttcgcacatccgtaccctgctgctgaccttcttcttccgtcagctgccg
gagctgatcgagcgtggctacatctacatcgcccagccgccgctgtacaaggtcaagaaa
ggcaagcaagagcaatacatcaaagacgacgacgccatggaagagtacatgacgcagtcg
gccctggaagacgcgagcctgcacttgaacgaggaagccccaggtatctccggtgaagcc
ctcgagcgcctggtgaacgacttccgtctggtgatgaagaccctcaagcgtctgtcgcgc
ctgtacccacaggagttgaccgagcacttcatctacctgccagcggtgagcatggagcaa
ctgtccgatcacgcagcgatgcaggattggctggccaagtacgaagttcgcctgcgtacc
gtcgagaaatcgggtctggtctacaaggccagcctgcgtgaagaccgtgaacgtaacgtc
tggctgccagaggtcgagttgatctcccacggcctgtcgaactacgtcaccttcaatcgc
gacttcttcggcagcaacgattacaagaccgttgtctctttgggcgctcagctgagcagc
ttgttggacgaaggtgcgtacatccagcgtggcgagcgcaagaagccagtcaccgagttc
aaggaagcccttgaatggctgatgactgaaagcaccaagcgtcacaccatccagcgatac
aaaggtctgggtgagatgaacccggatcagctgtgggaaaccaccatggacccaagccag
cgccggatgctcaaagtgaccatcgaagacgccattggcgcggaccagatcttcaacacc
ctgatgggtgatgcggtcgagcctcgtcgtgacttcatcgaaagcaacgccttggcggtg
tccaacctggacttctga
DBGET
integrated database retrieval system
