Pseudomonas hormoni: KJF94_27170
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Entry
KJF94_27170 CDS
T09556
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
phom
Pseudomonas hormoni
Pathway
phom02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
phom00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KJF94_27170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phom03021
]
KJF94_27170
Transcription machinery [BR:
phom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KJF94_27170
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
PhyR_sigma-like
Sigma70_r4
HTH_23
HTH_29
GerE
HTH_24
MPAB_Lcp_cat
HTH_40
HTH_Tnp_ISL3
HTH_11
PapC_N
Motif
Other DBs
NCBI-ProteinID:
QVW23483
UniProt:
A0ABX8EZ15
LinkDB
All DBs
Position
complement(5831199..5831699)
Genome browser
AA seq
166 aa
AA seq
DB search
MSSPEFAVQSLYSSHHGWLNTWLRARLGNAADAADLAQDTFVRLLQRTERLELKAPRAFL
RTIARGLVIDHWRREEIERAYLETIAHLPEAETPSTEARALVLELLESIARMLEGLKPKV
RQAFLLAQCEGLTHKQIAEQMGLSLRSVERYVADALFHCYLLRYEA
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcacctgagtttgctgtacagtcgctttacagtagccatcacggttggctcaac
acgtggctgcgcgcgcgactgggcaacgccgccgatgcggcggacctggcccaggacacg
tttgtacgcctgctgcaaagaaccgaacgcctggaactcaaggcccctcgcgcgtttctg
cgaacgattgctcgcggcctggtgatcgatcattggcgccgcgaagaaatcgagcgcgcg
tacctggaaaccatcgcccatttgccagaggccgaaacgccgagcacggaagcccgggcg
ctggtgcttgaattgctggaaagcatcgcgcgcatgcttgaaggactgaagccaaaagtg
cgtcaggcgtttctgctggcacagtgcgaagggctgactcacaaacagattgccgaacag
atgggcttgtctctccgttcagtggaacgctacgtcgccgacgccctgtttcactgctac
ctgctgcggtacgaagcatga
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