Pauljensenia hongkongensis: BH719_01055
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Entry
BH719_01055 CDS
T09763
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
phon
Pauljensenia hongkongensis
Pathway
phon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BH719_01055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phon03019
]
BH719_01055
03009 Ribosome biogenesis [BR:
phon03009
]
BH719_01055
Enzymes [BR:
phon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BH719_01055
Messenger RNA biogenesis [BR:
phon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BH719_01055
Ribosome biogenesis [BR:
phon03009
]
Prokaryotic type
rRNA helicases
BH719_01055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AOS46644
UniProt:
A0A1D8B0L1
LinkDB
All DBs
Position
complement(237763..240165)
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AA seq
800 aa
AA seq
DB search
MDAPAAVDAGAPTGERADGARAAQDGGADEGPEEEGSAAEDGGSGEEDTVSFADLGLPDE
LLQAVTDMGFVTPTPIQAEAIPPLLDLRDVVGIAQTGTGKTAAFGLPLLAIVDADEKAVQ
ALVLAPTRELAMQSAAAIEDFAARTAELVVVPVYGGSPYGPQIGALKRGAQVVVGTPGRV
IDLIEKGALDLSGVRMLVLDEADEMLRMGFAEDVETIASSAPDDRLTALFSATMPPAIEK
VAREHLKDPVKVAVSEESSTVDTIHQTYAVVPYKHKIGALSRVLATRAQHIAAGQEDADA
AIVFVRTRVDVEEVSLELSGRGFRAAGISGDVAQTERERMVERLKSGSLDVLVATDVAAR
GLDVERISLVVNFDVPREPEAYVHRIGRTGRAGRQGRSLTFFTPREHTRLRRIEKLTGTP
MEEVAIPSPAAVSEFRARRLLEGVGARVERGRLGMYRELLEQMAASLDVEDVAAALIAQA
VGDEGPAPRAESDRRGRGRARREEGLDESGEFVGASFEAGRDKDRPLKGGRDGARRRGGG
RAVAGPGTRYRVEVGRKDRVKPGSIVGAIAGEGGIDGRDIGHIDIFPTFSLVDITADLSA
EQLSRISKGYVSGRQLRIRVDEGPGRRDRFERGGFERPSRGERRSDRDDRSEREDRGGRD
ERFDRPSRGDRRSDRDDRLGEDRRGGFERSGRGDRFDRGDRGGRDERFDREDRRPGRGDR
FDRSDRFEADGRGGRESQRGGWHRSVRTERWERDIKKRRARDDFGARESGRGFGHKDRRR
DEGRGRNDDARRFGKRRYED
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
ctggacgccccggccgcagtcgacgcgggcgcgccgaccggggaacgggccgacggggcg
cgcgccgcccaggacggcggcgccgacgaaggccccgaagaggaggggagtgcggcggag
gacgggggctccggagaagaggacacggtctccttcgcggacctcggcctgccggacgaa
ctcctccaggccgtcacagacatgggattcgtcacaccgacccccatccaggccgaggcg
atcccccctttgctcgacctgcgcgacgtcgtcggcatcgcccagaccggcacgggcaaa
accgcggccttcggcctgcccctgctggcgatcgtcgacgcggacgagaaggccgtccag
gccctggtgctcgcccccacccgcgagctcgccatgcagagcgccgccgccatcgaggac
ttcgcggcccgcacggcggagctggtggtcgtccccgtgtacggcggcagcccctacggt
ccgcagatcggcgccctcaagcgcggcgcccaagtggtcgtgggcactcccggccgcgtc
atcgacctcattgagaagggcgcgctggatctttccggtgtgcgcatgctggtcctggac
gaggcggacgagatgctgcgcatgggcttcgccgaggacgtggagaccatcgcctcctcc
gctcccgacgaccgtctcacggcgctgttctcggcgacgatgccccccgccatcgagaag
gtggcgcgcgagcacctcaaggacccggtcaaggtcgccgtctccgaggagtcgtcgacc
gtcgacacgatccaccagacctacgcggtcgtcccctacaagcacaagatcggcgccctc
agccgtgtcctggccacgcgcgcccagcacatcgccgcgggccaggaggacgccgacgcc
gccatcgtcttcgtgcgcacccgcgtcgatgtcgaggaggtgtcgctggagctgtccggg
cgcggattccgcgcggcgggcatctccggtgacgtcgcccagaccgagcgcgagcgcatg
gtcgagcgcctcaagagcggctccctggacgtcctggtcgccacggacgtggcggccagg
ggcctggacgtggagaggatctccctggtcgtcaacttcgacgtgccccgcgagcccgag
gcctacgtgcaccgcatcgggcgcacgggccgggcggggcgccaggggcgctcactgacg
ttcttcaccccccgcgagcacacgcgcctgcgccgcatcgagaaactcacggggacgccg
atggaggaagtggcgatcccctcgcccgccgccgtgtccgagttccgggcccgccggctg
ctcgagggcgtgggcgcacgggtcgaacggggccgcctgggaatgtaccgggagctcctg
gagcagatggccgcctccctggacgtcgaggacgtcgcggcggcgctgatcgcccaggcc
gttggcgacgagggccccgcgccgcgagcggagtccgaccgccgggggcggggcagggcc
cgccgcgaggaggggctcgacgagtccggggagttcgtgggcgccagcttcgaggcgggg
cgcgacaaggacaggcccctcaagggcggccgtgacggagcccgccgccgcgggggcggt
cgcgccgtggcgggcccgggcacgcgctaccgggtcgaggtcggcaggaaggaccgcgtc
aagcccggttccatcgtcggcgccatcgccggagagggcgggatcgacggccgggacatc
gggcacatcgatatcttcccgacgttctcgttggtggacatcaccgcggatctgagcgcc
gagcagctctcgcgcatctccaagggctacgtctccggccgccagctgcggatccgggtg
gacgagggccccgggcggcgcgaccgcttcgagcgcggtggattcgagcgccccagcagg
ggcgagcgccgctccgatcgtgacgaccgttccgagcgggaggatcgcggtggacgcgac
gagcgcttcgaccgccccagcaggggggaccgccgctctgaccgcgacgaccgcctcggc
gaggaccggcgcgggggcttcgagcgctccggcaggggcgaccgtttcgaccggggggac
cgcggtggacgcgacgagcgcttcgaccgcgaggaccgccgtcctggtcgtggtgaccgt
ttcgaccgcagtgaccgtttcgaggcggatggacgcggagggcgcgagtcccagcgcggc
ggctggcaccgctccgtgaggaccgagcgctgggagagggacatcaagaagcgccgggcg
cgcgacgacttcggcgcgagggagtccgggaggggcttcggccacaaggaccgccgccgt
gacgaggggcgcgggcgcaacgacgacgcgcgccggttcggcaagcgccgctacgaggac
tga
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