Pauljensenia hongkongensis: BH719_01715
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Entry
BH719_01715 CDS
T09763
Name
(GenBank) RNA-binding protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
phon
Pauljensenia hongkongensis
Pathway
phon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BH719_01715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phon03019
]
BH719_01715
03009 Ribosome biogenesis [BR:
phon03009
]
BH719_01715
Enzymes [BR:
phon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BH719_01715
Messenger RNA biogenesis [BR:
phon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BH719_01715
Ribosome biogenesis [BR:
phon03009
]
Prokaryotic type
rRNA processing factors
BH719_01715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
TcdA_TcdB
Motif
Other DBs
NCBI-ProteinID:
AOS47971
UniProt:
A0A1D8B495
LinkDB
All DBs
Position
complement(<411235..413271)
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AA seq
679 aa
AA seq
DB search
MARGTAHNWRTVTPELDSPAPVATAASLLFQAPVFQEPAGAGGPDEAPSRRSADAGDEPK
EASPRRRRSSRTAPEDGAGADAKGVPDDDGAAGAPPKKRRTRKRSSAEAPSADGEGTGPQ
EDGEAPAPKRRRRAKKEDSAADPQEQDAHEAEGEGGRRRRRRRPRSSDEAEAGGDLTDQV
KALKGSTRLEAKKQRRREGRREGRRRHSITESEFLARRESVKRTMVIRDHEGLDQIAILE
DDLLVEHYVARRTSKSAVGNIYLGRVQNVLPSMEAAFVDIGRGRNAVLYAGEVNWDAVGL
DGKPRRIESALKSGDSVLVQVTKDPIGHKGARLTSQITLAGRYLVLIPNGSMMGISRKLP
DKERARLKKILKQVVPSGSGVIVRTAAEGASEEQIRADVARLTKQWEDVRAKQKSTRSAP
ALMRGEPELAVRVVRDIFNEDFTSLVIQGRGTYATVKEYVDELSPELSDRVEQWVGADDV
FHAHRIDEQLAKGMDRKVWLPSGGTLIIDRTEAMTVIDVNTGKYIGAGGTLEETVTRNNL
EAAEEIVRQLRLRDIGGIVIIDFVDMVLESNRDLVLRRLVECLGRDRTRHQVTEITSLGL
VQMTRKRVGEGLVEAFSTQCGACEGRGFIVHSHPVEHPGASDKNGKGSKRSKKSAEGRRA
GGEQAADHGRAKEALSAIA
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
ctggcacgggggaccgcccacaattggagaaccgtgacccccgaacttgattcccccgcg
cccgtcgcgacggcggcatccctgctcttccaggcgcccgtcttccaggagcccgcggga
gcgggcggccccgacgaggccccctcgcgccgcagcgcggacgcaggcgacgagcccaag
gaggcctccccccgcaggaggcgctccagccggaccgcccccgaggacggcgcaggagcg
gacgccaagggcgttcccgacgacgacggggcggccggggcgccgcccaagaagcgccgg
acccgcaagaggtcctccgcggaggccccgtccgccgatggggagggcacgggcccgcag
gaggacggcgaggcgcccgcccccaagcgccgcaggcgcgcgaagaaggaggattccgcc
gccgatccccaggagcaggacgcccacgaggcggaaggggagggcggccgcaggcgccgc
cgtcggcgcccccgctcctccgacgaggcggaagccggcggcgacctgaccgaccaggtg
aaggccctcaagggctcgacgcgcctggaggcgaagaagcagcggcgcagggaggggcgc
cgggagggccgcaggcgccactcgatcaccgagtcggagttcctcgcccgccgcgagtcg
gtcaagcgcaccatggtcatccgcgaccacgagggcctcgaccagatcgccatcctcgag
gacgacctcctcgtcgagcactacgtcgcgcgccgcacctccaaatcggccgtcggcaac
atctacctggggcgcgtccagaacgtcctgccctcgatggaggccgcgttcgtcgacatc
gggcgcgggcgcaacgccgtcctgtacgccggcgaggtcaactgggacgccgtcggcctc
gacgggaagccgcggcgcatcgagtcggccctcaagtccggcgactccgtgctcgtgcag
gtcacgaaggaccccatcgggcacaagggggcgcgcctgaccagccagatcacactggcc
ggccgctacctggtgctcatccccaacggctcgatgatggggatctcgcgcaagctgccc
gacaaggagcgcgcccgcctcaagaagatcctcaagcaggtcgtcccctccggttcgggc
gtcatcgtgcgcaccgccgccgagggcgcctccgaggagcagatccgcgcggacgtggcc
cgactgacgaagcagtgggaggacgtgcgcgccaagcagaagtccacccgcagcgcgccc
gccctgatgcgcggggagcccgagctcgccgtgcgggtcgtgcgcgacatcttcaacgag
gacttcacgagcctggtcatccagggccgggggacctacgccaccgtcaaggagtacgtc
gacgagctcagccccgagctgtcggaccgcgtggagcaatgggtgggcgcggacgacgtc
ttccacgcccaccgcatcgacgagcaactggccaagggcatggaccgcaaggtctggctg
cccagcggagggaccctcatcatcgaccgcaccgaggcgatgacggtcatcgacgtcaac
accggcaagtacatcggcgccggggggacgctggaggagacggtcacccgcaacaacctc
gaggccgcggaggagatcgtccggcagctgcgcctgcgcgacatcggcgggatcgtcatc
atcgacttcgtggacatggtgctggagtcgaaccgggacctggtgctgcgccgcctcgtc
gagtgcctggggcgcgaccgcacccggcaccaggtcacggagatcacttcgctgggcctg
gtccagatgacgcgcaagcgcgtgggggaggggctcgtcgaggcgttctccacccagtgc
ggcgcctgcgagggccgtggcttcatcgtccactcccaccccgtcgagcacccgggcgcc
tccgacaagaacggcaagggctccaagcgctccaagaagagcgccgaggggcgccgggcc
ggtggcgagcaggccgccgaccacgggcgcgccaaggaggcgctgagcgccatcgcc
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