Pauljensenia hongkongensis: BH719_04595
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Entry
BH719_04595 CDS
T09763
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
phon
Pauljensenia hongkongensis
Pathway
phon03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
phon00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BH719_04595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phon03021
]
BH719_04595
03400 DNA repair and recombination proteins [BR:
phon03400
]
BH719_04595
Enzymes [BR:
phon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BH719_04595
Transcription machinery [BR:
phon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BH719_04595
DNA repair and recombination proteins [BR:
phon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BH719_04595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
DUF7659
CR6_interact
Motif
Other DBs
NCBI-ProteinID:
AOS47227
UniProt:
A0A1D8B264
LinkDB
All DBs
Position
complement(1095349..1099251)
Genome browser
AA seq
1300 aa
AA seq
DB search
MLDAKTFDSLKITLATGDDIATWSHGEVKKPETINYRTLKPERDGLFGEQIFGPTRDWEC
ACGKYKRVRYKGIICEKCGVEVTRSKVRRERMGHIDLAAPVTHIWYFKGVPSRLGYVLNL
APKDLEKVIYFAAYMITEVDEKGRHEDLAELRAELEVQKKQMENNRDAAINDFAEKLEAD
IAQMEASGASAAERDRARKQGERDMAKVRRRFDADIDGLEDTWERFKNLKVGDLEGNERL
YRSMVARYGTYFKGDMGASAIQKRLETFDLAAEVEALRQTIASDSGPRKARAIKRLKVIN
AFVVTGNSPASMVLTKIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNTRLKRLLEL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVAGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLQLHQCGLPKQMALELFKPFVMKRLVEKNYAQNVKAAKRKVERQR
PEVWDVLDDVIREHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLACGAFNADFDGDQ
MAVHLPLGAEAQAEARILMLSTNNILKPSDGRPVAMPSQDMIIGLFHLTSTPDPSVPVEV
DEAGNPVVPYFSSQAEAQMAFDAGNLDLNATARIRFSDGTVPPEGWEAPEGWQPGDDIIL
ETSLGRAVFNEQLPTDYPFVNEVVGKKQLGDIVNTLTQRYPNVLVADCLDALKSAGFHWS
TWSGITIAFSDIQASPRKREILAGYEAKAAEIVEQFETGIILEETRYEELVKLWLQCTEE
VAQDMRDNFSERNTVYRMVNSGARGNWSQVQQIAGMRGLVSDPKQKLIEQPIKANYREGL
TVLEYFIATHGARKGLVDTALRTAESGYLTRRLVDVSQDVIVREADCGTRAGLKIRIAQK
NDAGQWEPSELIETTAYARNLARDAVNEAGEVVMPAGTDLGDDQLAELVAAGVGEITCRS
VLTCESQVGTCAACYGRSLATGKQVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGAASAA
DITQGLPRVQELFEARAPKVEAKMNEAAGRVHIDDEDPSVRRVVITRDDAKEDLVVEVSR
RQKLLVAEGQHIDAGTPLTEGQLDPKEILRIMGRNVAQKMLVDEVQKVYRDQGVGIHAKH
IEVIVRQMLRRVTILEPGDTSFMPGELVDRMAYLTQNRRVAAEGGQPASGRQMLMGITKA
SLATDSWLSAASFQETTKVLTEAAMNGKSDSLVGLKENVILGKLIPAGTGLARYNDVIVE
PTPEALANSNYSEVDFQDGQVSEDFLDTLGSIDFGMSFHE
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
ttgctggacgccaaaacgttcgacagcctgaagatcaccctggcaacgggcgacgacatc
gccacgtggagccacggtgaggtcaagaagccggagaccatcaactaccgcacgctcaag
cccgagcgcgacggcctgttcggtgagcagatcttcgggcccacgcgcgactgggagtgc
gcgtgcgggaagtacaagcgcgtgcgctacaaggggatcatctgcgagaagtgcggcgtg
gaggtcacccgctccaaggtgcgccgcgagcggatgggccacatcgacctggcggccccc
gtcacccacatctggtacttcaagggagttccctcgcgcctgggctacgtgctcaacctg
gcgccgaaggacctggagaaggtcatctacttcgcggcctacatgatcaccgaggtcgac
gagaagggccgccacgaggatctggccgaactgcgcgccgagctcgaggtgcagaagaag
cagatggagaacaaccgcgacgcggccatcaacgatttcgccgagaagctcgaggccgac
atcgcccagatggaggcctcgggggcctccgccgccgagcgcgaccgcgcccgcaagcag
ggcgagcgcgacatggcgaaggtccgccgccgcttcgacgccgacatcgacggcctcgag
gatacgtgggagcgcttcaagaacctcaaggtcggcgacctggagggcaacgagcgcctc
taccgctccatggtcgcccgctacgggacctacttcaagggcgacatgggcgcctcggcc
atccagaagcgactggagaccttcgacctggccgccgaggtggaggcgctgcgccagacc
atcgcctcggactccggtccccgcaaggcccgcgccatcaagcgcctcaaggtcatcaac
gccttcgtggtcaccgggaactccccggcgtccatggtgctcacgaagatcccggtgatc
cccccggacctgcgccccatggtgcagctcgacggcgggcgcttcgcgacctcggacctc
aacgacctgtaccgccgcgtcatcaaccgcaacacgcgcctcaagcgcctgctggagctg
ggcgccccggagatcatcgtcaacaacgagaagcgcatgctccaggagtccgttgacgcc
ctcttcgacaacggccgccgcgggcgccccgtcgctggcccgggcaaccgccccctgaag
tccatctcggacatgctcaagggcaagcagggccgtttccgccagaacctgctgggcaag
cgcgtcgactactcgggccggagcgtcatcgtcgtgggcccgcagctgcagctgcaccag
tgcggcctgcccaagcagatggccctggagctcttcaagcccttcgtcatgaagcgcctg
gtcgagaagaactacgcgcagaacgtcaaggccgccaagcgcaaggtcgagcgccagcgc
cccgaggtgtgggacgtcctcgacgacgtcatccgcgagcacccggtgctgctcaaccgc
gcgcccacgctgcaccgcctcggcatccaggcgttcgagccccagctgatcgagggcaag
gccatccagctgcaccccctggcctgcggcgccttcaacgccgacttcgacggcgaccag
atggcggtccacctgccgctgggagcggaggcgcaggccgaggcccgcatcctgatgctg
tcgacgaacaacatcctcaagccctccgacggccgtcctgtggccatgccgtcgcaggac
atgatcatcggcctgttccacctgacgtcaaccccggacccgtcggtcccggttgaggtg
gacgaagccggcaaccccgtggtgccgtacttctccagccaggcggaggcccagatggcg
ttcgacgcgggcaacctggacctgaacgcgaccgcgcgcatccgcttctccgacggaacc
gtgccgcccgagggctgggaggcccccgagggatggcagcccggggacgacatcatcctc
gagacctccctggggcgcgcggtcttcaacgagcagctgcccaccgactacccgttcgtc
aacgaggtcgtcggcaagaagcagctcggcgacatcgtcaacacgctcacccagcgctac
ccgaacgtgctggtcgccgactgcctcgacgccctcaagtccgccgggttccactggtcg
acgtggtcgggcatcacgatcgccttctccgacatccaggcgtccccgcgcaagcgcgag
atcctggcgggatacgaggcgaaggccgccgagatcgtcgagcagttcgagacgggcatc
atcctggaggagacccgctacgaggaactcgtgaagctgtggctgcagtgcaccgaggag
gtcgcccaggacatgcgcgacaacttctccgagcgcaacaccgtgtaccgtatggtgaac
tcgggggcccgcggcaactggtcccaggtgcagcagatcgccggcatgcgcggcctcgtg
tccgacccgaagcagaagctcatcgagcagcccatcaaggcgaactaccgcgagggcctc
accgtcctcgagtacttcatcgccacgcacggcgcccgtaagggcctggtcgacacggcc
ctgcgcaccgccgagtccggctacctcacgcggcgcctcgtcgacgtctcccaggacgtc
atcgtccgcgaggccgactgcggcacgcgcgcgggcctgaagatccgcatcgcccagaag
aacgacgccggccagtgggagccctcggagctcatcgagacgaccgcctacgcccgcaac
ctcgcccgcgacgcggtgaacgaggccggggaggtcgtcatgccggccggcaccgacctg
ggcgacgaccagctcgccgagctggtggccgccggcgtcggcgagatcacgtgccgttcc
gtgctcacctgcgagtcgcaggtcggcacgtgcgcggcctgctacgggcgctccctggcg
accggcaagcaagtggacatcggcgaggccgtcggcatcatcgccgcccagtccatcggc
gagcccggcacgcagctgacgatgcgcaccttccacaccggtggcgccgcctccgcggcg
gacatcacgcagggcctgccccgcgtgcaggagctcttcgaggcgcgcgcgcccaaggtc
gaggcgaagatgaacgaggccgccggccgcgtccacatcgacgacgaggacccctcggtg
cgccgcgtggtgatcacccgcgacgacgccaaggaggacttggtcgtcgaggtgtcgcgc
cgccagaagctgctggtggccgagggccagcacatcgacgcggggacgcccctgaccgag
gggcagctggaccccaaggagatcctgcgcatcatgggccgcaacgtggcccagaagatg
ctggtggacgaggtccagaaggtgtaccgcgaccagggcgtgggcatccacgcgaagcac
atcgaggtcatcgtccgccagatgctgcgccgcgtgaccatcctggagccgggggacacc
tcgttcatgcccggcgaactcgtcgaccgcatggcctacctgacgcagaaccgccgcgtc
gcggccgagggcgggcagccggcctcgggccgccagatgctcatgggcatcacgaaggcg
tcactggccacggactcgtggctgtccgccgcctccttccaggagacgacgaaggtcctc
accgaggccgccatgaacggcaagtcggactcgctggtcggcttgaaggagaacgtgatc
ctcggcaagctcatccccgcgggcacgggcctggcccgttacaacgacgtcatcgtcgag
cccacgccggaggccctggccaactccaactactcggaggtggacttccaggacgggcag
gtgtccgaggacttcctcgacacgctcggctcgatcgatttcggcatgagcttccacgag
tga
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