Phormidium sp. PBR-2020: JWS08_00020
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Entry
JWS08_00020 CDS
T07578
Name
(GenBank) hypothetical protein
Organism
phor
Phormidium sp. PBR-2020
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
EIF3I
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_NWD2_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_SCAP
Ge1_WD40
NBCH_WD40
WD40_RFWD3
nSTAND1
eIF2A
Beta-prop_WDR35_TULP_N
Cytochrom_D1
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD40_like
Beta-prop_WDR75_2nd
B-prop_COPA_B_2nd
RMC1_N
Beta-prop_IP5PC_F
YNCE
Beta-prop_HPS5
AAA_16
NACHT
AAA_22
RsgA_GTPase
nSTAND3
ATPase_2
AAA_23
ABC_tran
AAA_29
Motif
Other DBs
NCBI-ProteinID:
UCJ12271
LinkDB
All DBs
Position
complement(3290..8284)
Genome browser
AA seq
1664 aa
AA seq
DB search
MDVAANNEKTLHQLAQAIALSQGEFKLILVRCNYEPLCDRWSQKLTQTCQEIHQFTLYQY
RLRPTSQHLLQDIEQIRQTYPQLDQGGLQLLGLNQLRDIPGFLATTNQVRDRLRHVCPFP
IALWLNDTSFTQMFHVANDLESWATSKQFYAESQDLQNLLTTLTQTFFQKLPQASDEQWL
GMEPLLSPQQQQDLDLAQQELNALGKSLAPDLQADLALLRSHQALQEDDLDQAEMALEQG
LEQGGKVWQTGRSQRLSWGAFQRGIVSLWRQEQAQQKQDQHRPLSPLTTIPALSPEAIRV
PQQEFDCSVQLLREAQPSDSNSNLGDLADIVEQRAVVGLLAALALSLQTSPPAPVSEQIA
ALVTVNRRLRGLAGFPFPRLWLQGLVHLHQLYFQDTRDYLHAFQTRQQIQQVERYAGTRS
FIGASRLEEIFQPCRRLDELSPEIGRSGRGDDIRLLLQRLHDRQHKIIVIHGESGVGKSS
LVNAGLLPLLRQHIFDGGRQGMPILLRVYESWRSQLQDALSQDALSQDALTARKTPLDAI
KAQLLALHQHHHQVILIFDQFEEFFLTHPSPQEQRAFFDFIGHLCSDVVNLGALKVVFSL
RTPDLTGLLPCNELESMQCIGQNILDKEMLYKLGNFSPQRTLAILTQLAPHFSPELRSQL
VADLSQETEEVRPIELQIVGFQLESEQRWTLPHYKALGDCPKQTLISRYLDDIVGDCGPE
QQDLANAILLLLTDERGTRPLRREADLLQALEDIPQLQPTAGGTLSSPLSLAEALGLVLE
IFTGSGLVLEIPGEPPRFQLVHDYLAEFIQASRQSDLLAALEEERRQRLAAEQTLEALKQ
QQTQVKRRTRWLSAVGGLVMAVSLGVSTWATGEFRTAKFFTRLERQSRMASGQFERHQQL
EALLTATANARELQQFVGSSSTYPTVQPIYRLNQILRDINFRNSFEGHSDSVTTARFTPN
GRQVLSASSDETVNLWDMQTGELLQSLEGHSAQVNNVQFSDDGRQVVSASSDETVKLWDV
QTGELLQSFEGHSGRVNNVQFSGDGRQVVSASWDGTVKLWDVQTGELLQSLEYVGNPQFS
RDGRQVSSLLHYRIVLYRNDAASSHRIEKVIVKLWDVQTGELLNSFEDDFGEDIFALLSP
DGRQVVLASADGTMKLWDVQTGELLHAFDGHSSPVKTAQFSKDGRQVLSASEDRTMKLWD
VQTGELLHAFDGHSNWVNSVQFSEDGHQVVSASSDGTVKLWDVQTGELLQSLEGHSNRID
SVQFSPDGRQVVLTSGNRTVKLWDVVQTGELLHAFDSHSNRIDSVQFSPDGRQVVSASLD
GTLKLWDVQMGELLHSFEGHSGSVDSVQFSPDGRQVVSASWDETMKLWDVQMGELLHSFE
GHSGPVINARFSGDGRQVVSASWDETMKLWDVQTGELLHSFEGHSGSVDSVQFSPDGRQI
LSTSDDETLKLWDVQTGELLHSFDGHSGSVNSVQFSGDGRQVVSASSDGTVKLWDVQTGE
LLHSFEGHSYWVINARFSGDGRQVVSASSDGTVKLWGVQTGELFHSFEGHSGPVINAQVS
PDGRQILSTSLDGTVKLWDVQTGELLHSFEGHSSPVMTAQFSNDGRQVLSASRDGTVKVW
RVNSLDEQIDLACDWLRPYLTHNPNVTDQDRAVCNLPPRPPSPD
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgctgccaacaatgagaaaaccctacaccaattggctcaggcgatcgcccta
tcccagggagaatttaaactcattttagtacggtgcaactatgagccattatgcgatcgc
tggtcgcaaaaactgacacagacctgtcaggaaattcatcaatttaccctctatcagtat
cgattacgacccaccagtcagcatctgttgcaagacattgagcagattcgtcaaacctat
ccccagctagaccaagggggattgcaactgctagggttaaaccaactgcgggatatacca
ggatttttagccaccacaaatcaggttcgcgatcgcctacgtcacgtctgtccgttcccc
atcgccctctggttaaacgacaccagctttacccagatgtttcatgtggccaatgactta
gaaagctgggccacgtctaaacagttttatgccgaatcccaagacttacaaaatctcctc
accaccctcacccagacatttttccaaaaactcccccaggcatcagacgaacaatggcta
ggaatggaaccgctgctgtctccccaacagcaacaagacctcgacttggctcaacaagaa
ctcaacgccttgggaaagtccctggcccccgatttacaagcggatttagccctacttcgc
agtcaccaggccttgcaagaagacgatctcgaccaagctgagatggcccttgaacaaggc
ctcgaacaaggcggcaaagtgtggcagacaggtcgctctcaacggttgagttggggggca
tttcagcggggcatcgtgagcctctggcggcaagaacaggcgcaacagaagcaagaccaa
catcggcccttaagtcctctcacgaccattcctgctctctctcctgaagcaattcgcgtc
ccacaacaggagtttgactgtagcgtccaattgttgcgggaggcccaaccctctgactca
aactctaacctaggggatttggccgatatcgtcgaacagcgggcggtggtgggcctattg
gcggccttagccctcagcctccagacctcaccaccagccccagtctctgagcaaatcgcc
gccttagtgaccgtgaatcgccgtcttcgggggttagctgggttcccctttccccgtctc
tggttgcagggactggttcacctgcatcagttgtatttccaggacacgcgcgactatctc
cacgccttccaaacccgccaacagattcagcaagtcgagcgttacgccgggacgcgatcg
tttatcggggccagccgccttgaggaaattttccagccttgtcgtcgtcttgatgaatta
tcccccgaaattgggcgatcgggacggggggatgatatccggttacttctgcaacgactc
catgacagacagcataaaatcatcgtcattcatggggagtctggggtggggaaaagttcc
ctagtcaatgcgggactgctgcctctgttgcgacaacatatttttgacggcggccgacag
gggatgcccatcctgttacgagtgtacgagagttggcgatcgcagctacaagatgccctc
tctcaagatgccctctctcaagatgccctcaccgcccgaaaaactcccttagatgccatc
aaagcccaactcctggccttgcaccagcatcatcatcaggtcattttaatctttgaccaa
tttgaggagtttttcctgacccatcccagtccccaagagcagcgagccttttttgacttc
atcggtcacctgtgcagtgatgtggtcaacttgggggcgctgaaggtggtgttttccctg
cgcaccccggacttaaccggcttgttgccctgcaatgaattggagtccatgcagtgcatt
ggtcagaacatcctcgacaaagagatgttgtacaaattgggcaacttctccccccagcga
accctagccattttgacccaactcgcgccccatttttctccggaactgcgatcgcagctc
gtcgccgatttaagtcaagagacagaagaagtacgccccatcgagcttcagattgtgggc
tttcagttagagtccgagcaacgatggactctgccccattacaaagccctaggggactgc
ccaaaacagaccctaatcagccgctatttagatgatatcgtcggcgattgtggccccgag
cagcaagacctggccaacgccattctgctcctcctgaccgacgaacgaggcacgcgcccc
ctgcgaagggaagcggatttattgcaagcattagaggacattccccaacttcagccaacc
gctggaggcacattatcttcgccgctgtccttagctgaagccttggggttggtcttggag
attttcaccggctccgggttagtgttggaaatccccggagaaccgccccggtttcagtta
gtgcatgattatttggcggagtttatccaagcttctcgtcagtcggatttactggcggcg
ttagaggaggaacggcgacaacggctggcggcggaacaaaccctagaggccctgaaacag
cagcaaacccaagtcaagcggcgaacccgttggctcagtgccgtggggggactggtgatg
gcagtgtccttaggggtcagcacctgggcaacgggggagttccgcacagcaaagtttttc
acccgtttggaacgacaaagccgtatggcttcaggacagtttgagcggcatcagcaactc
gaagccctcttgacggcaactgccaatgctcgggagttgcagcaatttgttggctcatca
tcaacctatcccacggttcaacccatctatcgactcaatcagattttacgggatatcaac
ttcaggaatagttttgagggtcattcggattcggtcacgactgcccgattcacccccaat
ggtcgccaagtcctttcggcttcctcggacgaaacagtgaatttgtgggatatgcagaca
ggggaactcctccagtcccttgaaggtcattccgcccaggtcaacaatgtccaattcagc
gacgatggtcgccaagtggtttcggcctcctcggacgaaaccgtgaagctttgggatgtt
caaaccggcgaacttcttcagtcctttgagggtcattcaggtagggtcaacaatgtccaa
ttcagcggcgatggacgccaggtggtttcggcttcctgggatggaacggtaaagctgtgg
gatgtgcagaccggcgaacttctccagtctcttgagtatgttggcaacccccaattcagt
agagatggtcgccaggtatcttcattgttacattatcggatagttctttatcgaaacgac
gcggcttcctcccacagaatcgaaaaggtaatcgtgaagctgtgggatgtgcagaccggc
gaacttctaaactcctttgaggatgatttcggtgaggacatatttgccctactcagcccc
gatggtcgccaggtggttttggcttcagctgacggaacgatgaagctgtgggatgtgcag
accggcgaactcctccatgcctttgatggtcattcgagtccggtcaagaccgcccaattc
agcaaagatggtcgccaggtgctttccgcttccgaagacagaacgatgaagctgtgggat
gtgcaaaccggcgaactcctccatgcctttgatggtcattccaattgggttaacagtgtc
caattcagcgaagatggtcaccaggtggtttcggcttcctcggacggaacggtgaagctg
tgggatgtgcaaaccggcgaacttctccagtctcttgagggtcattcaaataggatcgac
agtgtccaattcagccctgatggacgccaggtggttttgacttccgggaatagaacggta
aagctatgggatgtggtgcagacgggcgaactcctccatgcctttgatagtcattcaaat
aggatcgacagtgtccaattcagccccgatggacgccaggtagtttcagcttccttggac
ggaacgttgaagctctgggatgtgcagatgggggaactcctccactcctttgagggtcat
tcaggttcggttgacagtgtccaattcagccccgatggacgccaggtggtttcggcttcc
tgggatgaaacgatgaagctatgggatgtgcagatgggggaactcctccattcctttgag
ggtcattcaggtccggtcatcaatgcccgattcagcggtgatggtcgtcaggtggtttcg
gcttcctgggatgaaacgatgaagctgtgggatgtgcagacgggagaactcctccactcc
tttgagggtcattcaggttcggttgacagtgtccaattcagcccagatggtcgccagatt
ctttccacttccgacgacgaaacgttgaagctatgggatgtgcagaccggcgaactccta
cactcctttgatggtcattcaggttcggttaacagtgtccaattcagtggggatggacgc
caggtggtttcggcttcctcggacggaacagtgaagctatgggatgtgcagaccggcgaa
ctcctccattcctttgagggtcattcgtattgggtcatcaatgcccgattcagcggtgat
ggccgtcaggtagtttcagcttcctcggacggaacagtgaagctgtggggtgtgcagacc
ggcgaactcttccactcctttgagggtcattcgggtccggtcatcaatgcccaggtcagc
ccagatggtcgccagattctttccacttccttggacggaacagtgaagctatgggatgtg
cagacgggcgaacttctccactcctttgagggtcattcgagtccagtcatgactgctcaa
tttagcaatgatggtcgccaggtgctttccgcttcccgcgacggaaccgtaaaggtgtgg
cgcgtcaacagcttagacgaacaaatcgatctcgcctgtgactggctgcgtccctacctc
acccataatcccaacgtcaccgaccaagaccgcgccgtttgcaacctcccgcctcgtccc
ccttcccctgactaa
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