Phormidium sp. PBR-2020: JWS08_00595
Help
Entry
JWS08_00595 CDS
T07578
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
phor
Phormidium sp. PBR-2020
Pathway
phor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JWS08_00595 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phor03400
]
JWS08_00595 (xth)
Enzymes [BR:
phor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
JWS08_00595 (xth)
DNA repair and recombination proteins [BR:
phor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JWS08_00595 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
UCJ12369
LinkDB
All DBs
Position
complement(134697..135488)
Genome browser
AA seq
263 aa
AA seq
DB search
MKIATWNVNSIRTRQGLVCDWLRANPVEVLCVQETKVIDADFPRDPFEALGYELAVSGQK
SYNGVAILSRLPLEQVDIGFSALLPPEQVGDLDEQKRAIAATVAGVRLINLYVPNGGDYN
SDKYQYKLRWLALLYDYIQKTLDKNQNLCICGDFNIAPDDRDIHTPPGKTPVVGTTAAER
EALQRCLSLGLADAFRKFNQEAQQYSWWDYRAGAFPRNRGWRIDHHYLTPELYQRATACT
IDREPRQWTKPSDHTPVIVEWPD
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgctacttggaatgtcaactcaatccgcacccgccagggacttgtctgtgac
tggcttcgagccaatcctgtcgaggtgttatgtgtccaggaaaccaaggtcattgatgcc
gactttccccgcgatccctttgaagccctcggctatgagctagcggtttcggggcagaag
tcctataacggtgtcgccatcctcagtcgcctccccttagaacaggtggacatcggcttt
agcgccctgcttccccctgaacaggttggggatctcgatgagcagaaacgggcgatcgcc
gccaccgtcgcaggagtgcgtctgattaacctctatgttcccaatgggggcgactacaac
agcgataaataccagtacaaactccgttggctggctctgttgtacgactatatccaaaaa
acacttgacaaaaaccaaaacctgtgcatctgcggtgactttaacatcgccccagatgac
cgggatatccatacccctcccggcaaaacccccgtcgtgggaaccactgccgccgaacga
gaggccctacagcgatgtctgagtttggggttggccgatgcctttcgtaaatttaaccaa
gaggctcaacagtatagttggtgggactatcgagctggggccttcccccgtaatcggggc
tggcgcattgaccatcattatctgaccccagagctgtatcaacgggcaacggcctgcacc
attgaccgagagcctcgacaatggacgaaacccagcgaccataccccagtaattgtggaa
tggcccgattag
DBGET
integrated database retrieval system
