Phormidium sp. PBR-2020: JWS08_01005
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Entry
JWS08_01005 CDS
T07578
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
phor
Phormidium sp. PBR-2020
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phor03009
]
JWS08_01005
Enzymes [BR:
phor01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
JWS08_01005
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
JWS08_01005
Ribosome biogenesis [BR:
phor03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JWS08_01005
23S rRNA modification factors
JWS08_01005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
UCJ14185
LinkDB
All DBs
Position
220675..221478
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AA seq
267 aa
AA seq
DB search
MVKQRLDTLLVERQLCSSRQLAQRWIRAGEVRVNQQLVDKPGTAVAVDAEISVKPRSPFV
SRGGEKLDKALQVFPISVENRVCLDGGISTGGFTDCLLQRGAQRVYGVDVGYGQVDWKLR
QDERVILKERTNLRYLTPEQLYQGDDPRPDLAVADVSFISLAKVLPAIWNLLVSPRETLV
LVKPQFEVGRSRVGKKGVVRNLGDRADAIVQVRDAARNLGWCDRGLVTSPIQGPAGNVEY
LLWLHEQGTPQLDNATIQTTVQGKSTP
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
ttggtgaagcaacgtttggatacgctgttggtggagcgacaactttgttcgtcgcgtcag
ttggcgcaacgctggattcgggctggggaggtgcgggtgaatcagcagttggtggataag
ccgggaactgctgtggcggtggatgcggagatttctgtgaaaccgcgatcgccctttgtg
tctcggggtggggaaaagctggataaggcgttacaggtgtttcccatctcggtggaaaat
cgggtttgtctcgatggcgggatttccaccggcggctttaccgactgtctgttgcaacgc
ggggcgcaacgggtctatggggtggatgtgggctatggccaggtggattggaagttgcgc
caggatgagcgggtgattcttaaggaacggacgaatttacgctatctcaccccggagcaa
ttgtatcaaggggatgacccgcgcccagatttagcggtggcggatgtttcgtttatttct
ctggccaaggtgttgccggcgatttggaatttgttggtatcgcctcgggaaactctggtt
ttggtgaagcctcagttcgaggtggggcgatcgcgcgttggcaaaaaaggggttgtccgc
aatctcggcgatcgcgcggatgccattgttcaagttcgggatgcggcgagaaacctgggt
tggtgcgatcgcggcctcgtcacctcccccatccaaggaccggcgggcaatgtggaatat
ctcctctggctccatgaacagggaacccctcaactagacaatgccacgattcaaacaact
gtccaaggaaagtctaccccatga
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