Phormidium sp. PBR-2020: JWS08_01405
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Entry
JWS08_01405 CDS
T07578
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
phor
Phormidium sp. PBR-2020
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phor03036
]
JWS08_01405 (smc)
Chromosome and associated proteins [BR:
phor03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
JWS08_01405 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
Exonuc_VII_L
AAA_27
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UCJ12512
LinkDB
All DBs
Position
310869..314543
Genome browser
AA seq
1224 aa
AA seq
DB search
MVYIKEIELTNFKSFGGTTRVPFRREFTVISGPNGSGKSNILDALLFCLGIASSKGMRAD
RLPDLVNQQQNKRRSTVEASVSVTFDLSPEDLLWRRMQRADNSEEENVAEASEAGSGEDE
TPPQHQDWRVTRRLRVTPSGGYTSQYAINGEVCTLGELHEQLNELRVYPEGYNVVLQGDV
TSIISMNARERREIIDELAGVAAFDRKIDRAKEKFAEVEEREDRCRIVEKELTTQRDRLA
ADRLKAEQYQRLRQELQQKQEWARVLQWQQLRQRQEQIGEQLAAGDRTRGELQDSLAQLT
ENLKQASDELDVLNQQVKALGEDELLARQSELARQEAEQQQRQQRREELQQQRQEIEGAI
AQTERAIAQNRQQQEQLRQQQQLLETDQLPTLRESRELAQGELERARESANALADRAQAW
VQEQTQLRQQTETLLGTLEPQRTEQAQLQERLAQLGEQLSQRETAIAQREEQLQQSQQEY
QHLSQEEDTAQQHLQHLERSSQAAEEELQIQQDTQTRLLQEQRDKQRRLDKLEAQNQAIQ
EASGSYASQVVEQSGLSGICGSVSQLGRVESDVQIALETAAGGRLGFVVVEDDLVASAAI
QLLKEKRAGRATFLPLNKIRAPRFQRTPEVERSPGFIDYAVNLIDCEERYDDIFAYVFGS
TVVFDRLDNARRLLGQARMVTLDGELLEASGAMTGGSQRRGSSHLHFGHVETGESAEVKG
LRDRLRQIGEILERCEEEILRWSSELKLGAKALMEAKQQHRELQLRRERLGQDIESLQQQ
QEQGRSQQSQQRQELDSTQARLQQLQQELPQQEQQLQALREQLAELEKSQTHQEWQQYQQ
EIQQREEILAQRTQSLRDGEERLRELASQQGRLGEKIQERQQQLGELQSRGQEIEQQQAQ
LAQQHQELDEQIAQTRASFAEIEAKLGEEKQARDRAEAELRELRVNQQQTDWRLQKLQET
QEGRVEQLQQVRQHLREQEQDLPNPLPEVPPQLKLDALDKELRSLAKRIEAMEPVNMLAL
EEFERTQARLEELTEKLAILQDERQELLLRIENFTTLRLRAFKEAFDAVNENFAQIFAEL
SQGDGHLQLSDPEDPFNGGLNLVAHPKGKPVQRLASMSGGEKSLTALSFIFALQRYRPSP
FYAFDEVDMFLDGANVERLAKMIKKQAQAAQFIVVSLRRPTIAAAARTIGVTQARGAYTQ
VLGLKLQQQPQSETQESLSPERSV
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atggtttacatcaaagaaatcgaactcaccaattttaaatcctttgggggaaccacaagg
gttccgttccggcgggagtttacggtcatttcggggccgaatggttctggaaagtctaat
atcttggatgccctgttgttttgtttgggaattgcctcatcgaaggggatgcgggctgat
cgcctgccggatttagtcaatcaacagcaaaataaacgcagatcgacggtggaggccagt
gtcagtgtcacctttgatttgtctccggaggatctgttgtggcgacggatgcagcgagcg
gacaactccgaggaggagaacgtcgctgaggcctctgaagcggggtctggggaggatgag
acaccaccccagcatcaggattggcgggtgacgcggcggctgcgagtgacgccgtcgggg
ggctatacctcgcaatatgccatcaatggcgaggtttgtactctgggggagttgcatgaa
caactcaatgagttgcgcgtctatcctgagggctataatgtggtgcttcagggggatgtg
accagtattatctccatgaacgctcgggaacggcgggagattattgatgagttggctggg
gtggcggccttcgatcgcaaaattgatcgggcaaaagagaagttcgccgaagtggaggaa
cgcgaggatcgctgtcgcattgtggagaaggagttgacgacgcaacgcgatcgcctggcc
gccgatcgcctcaaagccgaacaatatcagcgattacgccaggaacttcagcagaaacaa
gagtgggctagagttttacagtggcagcaattgcgccaacgccaagagcagattggggaa
caattggcagccggcgatcgcactcggggggaacttcaggacagtctggcccaactcacg
gagaatttgaaacaggccagcgatgaactcgatgtgttaaatcagcaggtgaaggccctc
ggcgaagatgaactcttggcccgtcagtcggagttggcccgtcaagaagccgaacagcag
caacgccagcagcgacgggaggagttgcagcagcagcgtcaggagattgagggggcgatc
gcccaaaccgagagggcgatcgcacaaaaccggcagcaacaggagcaacttcgccaacaa
cagcaactcctagaaactgaccaactgcccaccctgagagagtcacgggagttggcccag
ggcgaactcgaacgagcgcgagagtccgccaacgccctagctgatcgcgctcaagcttgg
gtgcaagaacaaacccaactgcgtcaacaaaccgaaaccctcctgggaacccttgaaccc
caacgcaccgaacaggcccaacttcaggaacggctggcccaattgggggaacaactcagt
caacgggagacggcgatcgcccaacgggaggagcaactgcaacaaagtcaacaggagtat
caacacctcagccaagaagaagacaccgctcaacagcatctgcaacacctcgaacgcagc
agccaagccgccgaggaagagttacagattcagcaagatacccaaacccgtctcttgcaa
gaacagcgggacaaacaacgccgcctcgataagctcgaagcccaaaatcaagccattcaa
gaagcctccggcagttatgccagccaagtggtggaacagtcgggattgagcggaatttgt
gggtcggtatcccaactaggacgggtcgagagcgacgtgcaaatcgccctagaaaccgct
gccgggggacgattgggatttgttgtcgttgaggatgatttagttgcctctgcggcgatt
cagcttttgaaagaaaaacgggccgggcgggccacgtttctgcccctgaataagattcgc
gcccctcgttttcagcggactcccgaggtcgaacgcagtcccggttttattgactatgcg
gtgaatctgattgactgcgaggaacgctatgacgatatttttgcctatgtgtttggctca
acggtggtgtttgaccgcttagacaatgcccgtcggttgttgggacaggcgcggatggtg
accctcgatggggaactcctcgaagccagtggggccatgacggggggaagtcagcggcgg
ggatcgtctcatctccattttggccatgtggagaccggggaatcggcggaggtgaagggg
ttgcgcgatcgcctgcggcagattggcgagatccttgaacgctgtgaggaggagatttta
cgctggagtagtgaactgaaattaggggccaaggcgctgatggaggcgaaacagcaacat
cgggaactccaattgcgccgggaacgactggggcaggatattgagagtttacagcagcaa
caggagcaggggcgatcgcaacaaagtcaacaacgccaagaactcgatagcacccaagct
cgtttacagcaactgcaacaggaactccctcagcaagagcagcagttacaagccctccga
gaacaactagcggaattggagaaatcccaaacccaccaagaatggcaacagtaccaacag
gagattcaacaacgggaggaaatcctggcccaacgcacccagagtttgcgggatggagaa
gaacggttacgagaattagccagtcaacaggggcgactgggagagaaaatccaggaacgt
cagcaacagttgggagaactccagagtcgtggccaggagattgagcagcaacaggcgcaa
ctggcacaacaacaccaggagttagacgagcaaatcgctcagactcgtgccagttttgcc
gaaattgaggccaaattaggggaagagaaacaggcccgcgatcgcgctgaagccgaactg
cgggaattgcgcgtcaaccaacaacaaaccgactggcgtttacagaaactccaagaaacc
caagagggacgagttgaacaactccagcaagtgcgccaacacctgcgagaacaggagcaa
gacctccccaaccccctccccgaggttcccccccagctaaaactagacgcgttggacaaa
gaactccgtagcctcgccaaacgcatcgaggccatggaaccagtgaatatgttggcccta
gaagaatttgagcgcacccaagctcgattagaagaactgaccgaaaaactggcgattctc
caagatgaacgtcaggagttgctattacgcatcgaaaacttcaccaccctgcggttacgg
gcgtttaaagaagccttcgacgcggtaaatgagaattttgcccaaatcttcgccgaactg
tctcagggggacggacatctgcaactgagcgacccggaagacccgttcaatggcggcttg
aacttagtggcccatcccaaaggtaagcctgtgcaacggttggcctcgatgtcagggggg
gagaaatctctcacagcgttgagttttatctttgctctacaacgctatcgtccctcccca
ttttacgcctttgacgaggtggatatgtttctagacggggcaaatgtggaacgattagct
aaaatgattaaaaagcaggcacaagccgcacaatttattgtcgtgagtttgcgccgtccg
accatcgctgctgccgcgagaaccatcggtgtcacccaggcccgaggtgcgtatacccag
gttttggggttgaagttgcaacagcaaccgcaatctgagactcaagaatctctctcgcca
gagcgatcggtctga
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integrated database retrieval system
