Phormidium sp. PBR-2020: JWS08_01570
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Entry
JWS08_01570 CDS
T07578
Name
(GenBank) PAS domain S-box protein
Organism
phor
Phormidium sp. PBR-2020
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_9
PAS_4
PAS
HATPase_c
Response_reg
PAS_8
HisKA
GAF_2
CBS
VpsR
HATPase_c_2
GAF
Motif
Other DBs
NCBI-ProteinID:
UCJ12540
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All DBs
Position
complement(354372..358109)
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AA seq
1245 aa
AA seq
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MDVSSGSAILRNPNILSSQITLKEAIAQVRGITPQNSPKVSQNTLKDPDSDCWVVMEGDR
PLGILSEGDLLRGLMQAQGEDTPIRELITQPPLFLQESDCEDIWSLCQQLQQEGINYAVV
VDETEGLRGLISAKSLLQTLCQNREAKRQLDQLLEESERRFRRVFDSNVVGMMFTDFSGQ
ISDANDHFLQMLGYSRGDLQQGRLNWAEITPPEYRDLDLQAMEALQNSGSAQPWEKVYRH
RDGHPVWVLVGVALLSPEQGSCVCVVVDISDRKQSESILKRQLVAMETAIDGIGILQNHH
YIYLNGAHCQIFGYDSPSELLGQTWHHLFMPEELPRANQEIFPQLYRDGVWQGESQGRRQ
DGSSFPVEISLSQTDEGLLICVCRDITERKTTEQNLRDSEEKFRQLADVVDAVLWIIHCD
RRDCIYVSPGYERIWQKPLQELFISPDAWSESLHPGDRARVLAAIPKQLQGQYDEEYRIL
RPDGEIRWIRDRAFPILNEQGQPYRIAGIAEDITDLKQAAQENQKLFQQLTAFKLALDES
AIAAITDADGVITYANDRFLDISGYRREELLGKTHRLVNSGYHPPSFFKDLWSTILRGEV
WRGEVCNRAKDGSIYWVDSTVVPFLDAQGKPVQFLAVRFNITARKTAEFALKSSNALLST
ISQAQAQFITATNRLVIFEQLLAQLLDLTESQYGFIGEVLFRDDGSAYLDETLFKISGTP
YLRTHSITNVAWDAATRQFYDDNYEQGMEFENMNTLFGAVVITGKPVISNSPTTDSRRGG
TPEGHPPLNCFLGLPFFQGETLMGLVGIANRAGGYNQQIIDYLAPFLVTCSNLIEGYRID
HKRRQAEEKLSYTNEQLIRATRLKDEFLANMSHELRTPLNAILGMTEALQDEVFGDINDK
QRRALETVERSGTHLLQLINDILDVAKIESGQIELDCAPTSIKHLCESSLAFVRQQALKK
GIQLRLDLPPHLSAVILDERRIRQVLLNLLNNAVKFTLDGGKIRLTVTEVPAEASEETAT
LRFAVQDTGIGISPENIQKLFQPFVQIDSALNRQYEGTGLGLALVKRIVELHQGQVNLTS
EVGVGSCFSFTLPYRRVNQADSLTPSPTLSTAETASSVESSPLVLVAEDNEASLNTLASY
LTVKGYRLLTAKNGTEAVQLAASERPDIILMDIQMPGMDGLEATQLIRKNPDLEGVPILA
LTALAMEGDRDRCLAAGATDYVTKPVKLRELVQQIERMLVDSNFE
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcagctctgggtctgcaattctaagaaatcctaatatcttgagttcccaaatc
acacttaaagaggcgatcgcccaggtgcggggtataaccccccagaattctccaaaggtc
agtcaaaacacccttaaagacccagattcagactgttgggtggtgatggagggcgatcgc
cccctcgggattctcagcgaaggggatctcctacggggactcatgcaagcccaaggggaa
gacactccgattcgggagttgataactcaaccgcccttgtttctgcaagaatcagactgt
gaggatatctggagtctctgtcagcagctacagcaagagggaatcaactatgccgtcgtg
gtggatgagacggaggggctacggggcctgatcagcgccaagagtctgctacaaaccctt
tgtcagaatcgagaggccaagcgccaactcgatcaattactcgaagagagtgaaaggcgt
ttccgtcgcgtcttcgattccaacgtcgtcgggatgatgttcaccgactttagtggccag
attagcgacgccaacgatcactttttgcagatgttgggctattcccgaggggatctgcaa
caggggcgcttaaactgggccgagatcaccccccctgaataccgggatttagatctccag
gctatggaggccctacaaaactctggtagcgctcagccttgggaaaaagtctatcgtcac
cgggatggccatccagtctgggtgttggtgggagtggccctattatccccagaacagggc
agttgcgtctgtgtggtggtggatattagcgatcgcaaacagagcgaaagcatcctcaag
cgacaactggtggccatggaaacggccattgatggaattgggattcttcaaaatcatcac
tacatttacctcaacggcgctcattgtcagatttttggctatgattccccctcagaacta
ctcggccagacctggcaccacttatttatgcccgaggaactcccccgggcaaaccaggag
atttttccccaattgtatcgggatggggtttggcaaggagaaagccaaggacgacgccaa
gatggcagttcctttcccgtagaaatatctctgtctcagaccgatgaagggttattgatt
tgtgtctgtcgggatattaccgagcgcaaaaccacagaacaaaacctacgggacagtgaa
gaaaagttccgacaattagcagacgtcgtcgatgcggtgttgtggattattcattgcgat
cgccgcgattgcatttatgtcagccctggctatgaacggatttggcagaaacccctccag
gagctgtttattagcccggatgcttggtctgagagtctgcatccgggcgatcgcgctcgg
gttttggccgccattcccaaacaacttcaggggcaatatgacgaagaatatcgcatcctg
cgccccgacggtgagattcgctggattcgcgatcgcgccttccccattttgaacgaacag
ggacaaccctaccgcatcgccggcattgccgaagatatcaccgatctcaaacaagcggcc
caagaaaatcaaaaactcttccaacaactgacggcctttaaattagccctcgatgaatcg
gcaattgcggccattactgatgccgatggagtcatcacctatgccaatgaccggttttta
gacatttccggctatcgccgcgaggaacttctcggtaaaacccatcgcttggtcaattct
gggtatcatcccccgtccttttttaaagacttgtggtcaaccattttgcggggagaggtt
tggcgcggggaggtttgtaaccgtgccaaagatggctccatctattgggtggatagtacc
gtcgtcccctttttagatgcccaggggaagccggttcaatttttagccgttcgctttaac
atcacggctcgtaaaactgctgaattcgccttaaaaagtagtaatgcactcctctccacc
attagccaagcccaagcccaatttattacggctaccaatcgcttagtcatttttgaacaa
ttgctagcacaactgttagaccttactgagagtcaatatggatttattggtgaagtgctg
ttccgggatgatggcagtgcctacctcgacgaaaccctcttcaaaatcagcggaactcct
tatctgagaacccatagcatcaccaatgtagcttgggatgcggcgactcgccaattctat
gacgacaactatgagcaaggtatggagttcgagaatatgaataccctatttggggcagtt
gttataaccggaaaaccggtcatttccaactccccaaccacggactcacgccgaggagga
acccccgagggacatccccccttaaactgttttttaggactgccatttttccaaggtgag
accttaatgggcctcgtcggcattgccaaccgagccggaggctataatcaacaaattatt
gactatctcgccccctttctcgttacctgtagtaatctcatcgaaggctatcgcattgat
cacaaacgccgacaggctgaagaaaaattatcctacaccaatgaacaactcattcgggca
actcgcttaaaagatgagtttctcgccaatatgagccatgaactccgcacgcctctcaat
gccattttgggcatgacggaagctctacaagatgaggtatttggggatatcaatgataaa
caacggcgggcgttagagaccgttgaacgtagtggcactcacttattacagttaatcaat
gatattttagatgttgctaaaattgaatccgggcaaatagaattagattgcgccccaacg
tctattaaacatctctgtgaatccagtttggcttttgtgcggcaacaggccttaaaaaaa
ggcattcagttacgcttagacttaccccctcacctgtcagcggtaattctcgatgaacgg
cgcattcgtcaggtattgcttaatttgctcaataatgccgtcaaattcaccctagatgga
ggaaagattcgcctgacggtgacggaagttcctgcagaagcatctgaggaaacggccaca
cttcgttttgcagttcaggatactggaattggcatttccccagagaatatccagaaactc
tttcaaccctttgtccaaattgatagtgccttaaatcgtcaatatgagggaacgggttta
gggctggcgttagtgaaacgaattgtcgagctacaccaaggtcaggttaacttaaccagt
gaggtcggagtcggcagttgttttagctttactttaccctatcgtcgggtcaatcaagct
gattccttgaccccttctcccaccctctcgacggctgaaaccgcctcgtcagttgagtca
tctcctctagttttagtcgctgaagataatgaagccagtctcaataccttagctagttat
ctaacagttaaaggctatcggctgctgacggctaaaaatggaactgaagcggtgcagtta
gccgcctctgaacgacccgatattatcctgatggatattcaaatgccgggaatggatggt
ctggaggcgacgcaactgattcgcaaaaacccagacctagagggagttcccatcttagcg
ttaaccgcgttggctatggagggcgatcgcgatcgctgtttggccgcaggggcaacagat
tacgtgaccaaacctgttaaactaagagagttggttcaacagattgaacggatgttagtc
gactctaactttgaataa
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