Phormidium sp. PBR-2020: JWS08_02705
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Entry
JWS08_02705 CDS
T07578
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
phor
Phormidium sp. PBR-2020
Pathway
phor03420
Nucleotide excision repair
phor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JWS08_02705
03430 Mismatch repair
JWS08_02705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phor03400
]
JWS08_02705
Enzymes [BR:
phor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JWS08_02705
DNA repair and recombination proteins [BR:
phor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JWS08_02705
MMR (mismatch excision repair)
Other MMR factors
JWS08_02705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
SinI
DEAD
Helicase_RecD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UCJ12740
LinkDB
All DBs
Position
complement(628543..630870)
Genome browser
AA seq
775 aa
AA seq
DB search
MTLSESKPSLVDRPQLIQDLRNRLRPGQREMGDWQNGPLAVSAVPGSGKSTGMAIAAALT
IARQRLHPRHQLLIVTFTRSAAANIKAKIRQNLELLKLPKWGFSVSTIHGLAFKIAGRHP
ELSHLDLSQQTLIEDNHNQRLIRSCVEQWISEHPHLYQTLITGLEFDGEEAEQLRRQSVL
RTDVLPNLAQTVIQEAKSSGLSPDQVRNLGQLQADPYSILDIAAHLYDLYQQRLRSQQLI
DYNDAILAALNVLENPNIREHWQQETFAVFEDEAQDSSPLQQQLLDILAQTPDGLPNLIR
VGDPNQAINSTFTPADPIYFRRFCHECAQQQRQTTIQRAGRSSPILIEAANFTLNWINQQ
WAQQSQTPPRSATTNTPPPFEVQLIEAVTADDPQPNANPAPIAGGLQLHRPFDISETVDR
LAQTLTDLFAQHPQATAAVLVRQKNQGQFIASELSQHHHHLNIYHVEAEQRLSGIPLEML
NLLQFVHRPHSGEALKGALEVFVGRQLIPRQDLDRLASLPERFLYPTILEDPQPPEVKAA
RRLCRALLQARLELPQTHLIGFFALTLDYSASELATADKLNERLLQQTSDRLSLGEFLDN
LFNLVTREPFDRVDTDLSDSQYTQPGRLTILTMHKAKGLDWDFVFLPFLHENMIPGELYV
KPQIQFLGNFTLEEVARGQLRQHLWNRDALDHEPSQDCQSYEDYWHLAAQLKQAEEYRLL
YVAMTRAKRLLWLSAAKEAPFTWNKTENLQAIPASPPFNALCKYYPDAIHSTKTE
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgaccttaagcgaatctaaaccatctctggtcgatcgcccccaactgatccaagacctg
cgtaatcgcctccgtcccggacaacgagaaatgggagactggcaaaacggccccctcgcc
gtctccgccgttcctgggtctggcaaatccaccggaatggcgatcgccgccgccctcacc
atcgcccgacaacgactccatccgcgccatcaactcctcatcgtcaccttcacccgctcc
gccgccgccaacatcaaagccaaaattcgccaaaacctagaactcctcaaactccccaaa
tggggcttttccgtctccaccattcatggcctggccttcaaaattgccggtcgtcaccct
gaattatcccatctcgatctcagccaacaaaccctcatcgaagacaatcacaaccagcgt
ctcatccgtagttgcgtcgaacaatggattagcgagcatccccacctctatcaaaccctc
atcactggactcgaatttgacggcgaagaagccgaacaactccgtcgccaatccgtcctg
agaaccgacgttctgcccaacctggcccaaaccgtcatccaagaagccaaatcctccggc
ctttccccagaccaagtgcgaaacctcggccaactgcaagccgacccctattccatccta
gacattgctgcccatctctacgacctctaccaacagcgactgcgatcgcagcaactcatc
gactacaacgacgccattctcgccgccctcaacgtcctcgaaaaccccaacatccgagaa
cattggcaacaggaaaccttcgccgtctttgaagacgaagcccaagactcctccccccta
caacaacaactcctcgacatcctcgcccaaactcccgacggactccccaatctcatccgg
gttggcgaccccaaccaagccattaactccacctttacccccgccgatcccatctacttc
cgtcgcttttgtcatgaatgcgcccaacagcagcgacagaccaccatccaacgggccgga
cgtagtagccccattctcatcgaagccgccaacttcaccctcaactggattaaccaacag
tgggcccaacagtcccaaaccccgcctcgctcagccaccacgaacactcccccacccttt
gaagtccaactcatcgaagccgtcaccgccgatgacccccaacccaacgccaacccagcc
cccatcgccggaggcttacaactgcatcgtccctttgatatcagcgaaaccgtcgatcgc
ctggcccaaaccctaaccgatctcttcgcgcagcatccccaagccaccgccgccgttctc
gtccgtcaaaaaaatcaaggacagttcatcgccagcgaactcagccaacaccaccatcat
ctcaatatctatcatgtcgaagccgaacaacgactctccggcatccccctagagatgctg
aacctgctgcaattcgtgcatcgtccccattcgggcgaagccctcaaaggggccctagaa
gtcttcgtgggtcgtcaactcatcccccgtcaagacctcgatcgcctcgccagcctcccc
gagcgattcctctatcccaccattctcgaagacccccaaccccccgaagtcaaagcggcc
cgtcgtctctgtcgcgccctcctgcaagcccgactggaactgccccaaacccatctcatc
ggctttttcgccctaaccctagactatagtgccagtgaactggccaccgccgacaaactc
aacgagcgactgcttcagcaaaccagcgatcgcctctccctcggagaattcctagacaac
ctctttaacctcgtcacccgtgaacccttcgatcgcgttgacacagacttatccgactcc
caatacacccaaccgggacgactgaccattctcaccatgcacaaagccaaaggactagac
tgggatttcgtctttctcccctttctccacgagaatatgattcctggagagttgtacgtc
aagcctcaaatccaattcctggggaacttcaccctcgaagaagtcgcccgaggacaacta
cggcaacatctctggaaccgagacgccctcgaccacgaacccagccaagactgccaaagc
tacgaagactattggcacctagccgcccaacttaaacaagccgaagaataccgcctcctc
tacgttgccatgactcgggctaaacgactcctctggctatccgccgccaaagaagccccc
tttacctggaacaagacggagaacttacaagccatacccgcctcccctcctttcaacgct
ctctgtaaatattacccagatgctattcactcaacaaaaaccgagtaa
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