Phormidium sp. PBR-2020: JWS08_03340
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Entry
JWS08_03340 CDS
T07578
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
phor
Phormidium sp. PBR-2020
Pathway
phor03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
JWS08_03340 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phor03019
]
JWS08_03340 (rnc)
03009 Ribosome biogenesis [BR:
phor03009
]
JWS08_03340 (rnc)
03036 Chromosome and associated proteins [BR:
phor03036
]
JWS08_03340 (rnc)
Enzymes [BR:
phor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
JWS08_03340 (rnc)
Messenger RNA biogenesis [BR:
phor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JWS08_03340 (rnc)
Ribosome biogenesis [BR:
phor03009
]
Eukaryotic type
90S particles
RNase
JWS08_03340 (rnc)
Prokaryotic type
rRNA processing factors
JWS08_03340 (rnc)
Chromosome and associated proteins [BR:
phor03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
JWS08_03340 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
DUF8534
Motif
Other DBs
NCBI-ProteinID:
UCJ12849
LinkDB
All DBs
Position
773714..774460
Genome browser
AA seq
248 aa
AA seq
DB search
MVALHPRRQDALHQFILKLGLEPDSHLNWDLLDIALTHPTISSTRNYERLEFIGDAAIRL
ASAEFLWESYPEAKVGDYAAIRSVLVSDRTLADIAESYGFQRYLLVGGSASGDKAGYRSR
LADALEAVAAALYLSSHDTTLVRPWLDKPFRPLAEEVRQDPARQNYKAALQEWTQGHYRQ
LPDYRVVEQVTREHNSDRRFAAEVWLNDRCLGQGTGRSIKAAEQAAAREAFVALSQAENP
QQSPVSQA
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccctgcatccccgtcgtcaagacgctctacatcaatttatcctcaagttgggg
ttagaacccgactcccacctaaattgggatctcttggatatcgcgttaacccatccgacg
atttcctccactcgcaactatgagcgtttggagttcatcggcgatgcagcgattcggctg
gcctcagccgagtttctctgggagagttaccccgaggccaaggtaggagactatgcggcg
attcgttcggtgctggtgagcgatcgcactctggcggatattgccgagtcctatggcttt
caacgttacttgttagtgggaggaagtgccagtggggataaagccggctatcgctcccgg
ttagcggatgccttagaggcggtggcggcggccctgtatctgagtagccatgatacgacc
ttggtgcgcccttggctggataaaccctttcgtcccctggcggaggaggtgcgtcaagat
ccggctcgccaaaactataaggcggctctgcaagaatggactcaaggtcactatcggcaa
cttccggactatcgtgtggtggaacaggtcacccgagaacataatagcgatcgccgcttc
gccgctgaggtttggctcaatgaccgctgtctaggccagggaacggggcgatcaattaag
gcggcggaacaggcggcggcccgagaggcttttgtggccttatctcaggctgaaaatccc
caacaatcccccgtctcccaagcgtaa
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integrated database retrieval system