Phormidium sp. PBR-2020: JWS08_03680
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Entry
JWS08_03680 CDS
T07578
Name
(GenBank) UvrD-helicase domain-containing protein
Organism
phor
Phormidium sp. PBR-2020
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
AAA_25
DEAD
CorA
Motif
Other DBs
NCBI-ProteinID:
UCJ12910
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Position
839225..841774
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AA seq
849 aa
AA seq
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MPSSMPLTPEQHQAVYAKGSVAITAGAGTGKTYMLAQRYLHHLRDNGYSPLEVVAITFTK
KAALELRSRIREMIAQEMPDNLEIIAELEAAPICTFHSLAAQICRDRALDLGIPPDFRVL
DAIESQLWFEEASLKILNRLPEPLYEQVPYHLLEAILPQLLDDPLSVQAAFESSPDSWPS
LAQHLQDEIFDEILNQPLIQESLEILPRYSGSGKDTLEPARQQVYTALCRLQGGERSPQL
LKILIERNFSRERGSKKNWKAGGLEVIRQQLKDLRDLAKTYEAELQVLHLGELDEDLAKL
LPSLQEAFNWIYRELQTRKCRDRVLCFADLEIYALEALQDEQIRREYGDRFQAILVDEFQ
DTNPTQGKFLKALTQQATLTVVGDEKQSIYSFRRADIQVFQQMRQRIQQEGGEEVALSLC
FRTHPRLIEQINTLFRPLLKHLHQSLRSSRDEIPDAEPDVQVFCLPEAPTWPKAQKRAAE
AYRMAEFVQQWLETGEVAAGEIAILARTNAPLGVYAEALEARGIPIALAGGGSLLETREA
KDGMALLECVCHPEDDRALVAVLRSPFFALSDRALLLIKQQTDGNPSLTWWQRLQQVDWA
SLDCEAEELPPISPLTVLEALRKFAQEESPARVLQEGDRLTGYTAVLANLPSCRRRLADW
RGFREFVRDIEGGDRSLYSVVRRLQRLRAMDAAIPRLPLDASNAVSLMTIHGSKGLEWKR
VILGDLSVKSSARSDSVLFDPEIGLAVKFSDDFEREGKPFLYVYLQRLQRQLEDQESLRL
LYVALTRSRDKLILTACEPKGGFLEQLQPGFDAAAIPLGTWELPPDEELSFSAAPPPEPP
PLGELLLRD
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
ttgccttcttctatgcccctaacccccgaacaacaccaagccgtctacgccaaaggaagt
gtcgccatcaccgccggggcaggaaccggcaaaacctatatgttggcccaacggtatctg
catcatctgcgagacaatggctactcccccctcgaagtcgtcgccattaccttcaccaaa
aaagccgccctggaactgcgatcgcggattcgggagatgattgcccaagagatgcccgat
aacctagagattatcgccgaactcgaagccgcccccatctgtaccttccacagtctcgcc
gcccaaatttgccgcgatcgcgccctcgatttaggcattcccccagatttccgagtcttg
gatgccattgagagtcaactttggtttgaggaagccagtctcaagattctcaatcgcctc
ccggaacctctctacgaacaggttccctatcatctcctagaggccattctgcctcaactc
ctcgacgatcccctctccgtgcaagccgcctttgagtcgtctcccgattcctggccctcc
ctggcccaacatctccaagatgagatctttgacgagattctcaaccagcccctgattcaa
gagagtttagagattctgcctcgctatagcggcagtggcaaagataccctcgaacccgct
cggcaacaggtctataccgccctctgtcggctccagggaggggagcgatcgccccaactg
ctcaaaattctcattgagcgcaatttcagccgggaacggggcagtaagaagaactggaag
gcgggaggattagaggtgattcgccaacagttgaaagacttgcgagatttagccaaaacc
tatgaagcggaactccaggtattgcacctgggggagttggatgaggatttagcgaaatta
ttaccgtctctccaggaggcttttaattggatttaccgagaattacaaacccgcaaatgt
cgcgatcgcgtgttgtgttttgccgatttagaaatctatgccttagaagccctgcaagat
gagcagattcgtcgtgagtatggcgatcgcttccaagccatcctcgtcgatgaatttcaa
gacaccaaccccacccaggggaagtttctcaaggcgttaacgcaacaggcgacgctcacc
gtggttggcgatgagaaacaatctatttatagctttcgccgggctgatatccaagtcttt
cagcaaatgcggcaacggattcaacaagagggaggagaggaagttgccctaagtctgtgt
ttccgcacccatcctcggctgattgaacagattaataccctcttccgccccctgctgaag
cacttacatcaatccctgcgatcgtctcgtgacgagatccccgatgctgaaccggatgtg
caggtgttttgtctcccggaagccccaacctggcccaaggcccagaaacgggcggcggaa
gcctatcgcatggcggagtttgtgcaacagtggctggagacgggggaggttgctgccggg
gagattgccattttagcccgtaccaatgccccattgggagtctatgcggaggccttggaa
gcccgaggtattcccattgctttggcgggagggggttcgttgttagagacgcgggaagcc
aaggatggtatggcgttgctggagtgtgtttgtcatcctgaagatgatcgggcgttagtg
gcggtgttgcgaagtcccttttttgccttgagcgatcgcgccctcttgttaattaaacaa
caaaccgatggcaatccttccttaacctggtggcaacggttgcaacaggtggattgggcc
tctcttgactgtgaggctgaagaacttccccctatttcgcccctgacggtgttggaggcg
ttacggaagttcgcccaggaggagtctccggcgagagtcttgcaagagggcgatcgcttg
acgggctatacagcggtgttagccaatctcccgagttgtcgccgtcgtctagcggattgg
cggggatttcgggagtttgtgcgggatattgaggggggcgatcgcagtctgtatagcgtc
gtgcgtcgcctacaacgattacgggccatggatgccgccattcctcggcttcccctcgat
gccagtaatgcagtgtccttaatgaccattcatgggtcgaaaggattagaatggaaacgg
gtaattttaggggatttgtccgtgaaatcttctgcccgcagcgactccgttttattcgat
ccagagattgggctggcggtgaagtttagtgatgattttgaacgagagggaaagccattt
ctctatgtttatttacagcgacttcagcgacaactcgaagaccaggaatccctacggtta
ttatatgtcgccttgacgcgatcgcgggacaaactcatcctaaccgcctgcgaacccaag
ggcggatttttagagcaattacagcccggattcgacgccgccgccattcccctaggaacc
tgggaactgcccccagacgaggaactcagcttcagcgccgccccacctcccgaaccgccg
cccttgggagaactgttactcagagattaa
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