Phormidium sp. PBR-2020: JWS08_03865
Help
Entry
JWS08_03865 CDS
T07578
Name
(GenBank) phycobilisome rod-core linker polypeptide
KO
K02286
phycocyanin-associated rod linker protein
Organism
phor
Phormidium sp. PBR-2020
Pathway
phor00196
Photosynthesis - antenna proteins
phor01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
JWS08_03865
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
phor00194
]
JWS08_03865
Photosynthesis proteins [BR:
phor00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Phycocyanin (PC)
JWS08_03865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBS_linker_poly
CpcD
Motif
Other DBs
NCBI-ProteinID:
UCJ12945
LinkDB
All DBs
Position
complement(879163..880062)
Genome browser
AA seq
299 aa
AA seq
DB search
MAITTAATRLGTSAYDDTNRVELRPNWTEDEAQIAIRAVYRQLLGNDYVMASERLTSAES
LLCDGSITLREFVRCVAKSELYKTKFFYTNFQTRFTELNYKHLLGRAPYDESEVIFHLDL
YQNEGYDADIDSYIDSVEYVENFGDNIVPYYRGFSTQRGQKTVGFTRMFQLYRGYANSDR
AQLRGSESRLAQELGRNSSSTVVGPSNSNEGWAYRPSKAGVAPSRTYGLSATGDADTRMY
RIEVTKLLGRNYPNNLRRGGTPTVRRSSRSFFVPYNRLSQTLQRIQREGGKVASIEPAN
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
ttggctattactaccgctgcaacccgtctcggcacctcggcctacgatgacacgaaccgg
gtcgaactgcgccccaactggacggaagacgaagctcagattgccatccgcgccgtctac
cgtcagcttttggggaacgattacgtcatggcatcggaacgcctgacgagtgctgaatcg
ctgttatgcgatggcagcatcaccctgcgcgagttcgttcgctgcgtggctaagtctgaa
ttgtataagacaaagttcttttacaccaactttcagactcgctttaccgagttgaactac
aaacatctgctcggacgcgcaccctacgacgagagcgaagtaatcttccacttggacttg
taccaaaacgaaggctacgacgcagacatcgattcctacatcgattccgtcgagtatgtc
gagaacttcggcgacaacattgtcccctactatcgtgggtttagcacccaacggggtcaa
aaaaccgtgggcttcacccggatgttccagttgtatcgcggttacgctaacagcgatcgc
gctcaactgcggggttcggagtctcgcctagcccaagaactcggacgcaacagctcatcg
acggtggttggcccctccaactcgaacgaaggttgggcctatcgtccctcgaaggctggc
gtggccccgtcgcggacctacggcttgtccgccaccggtgacgccgacactcggatgtac
cgcattgaagtgacgaaactcttgggacggaactatcccaataacctgcgtcgtggtgga
actcccactgtgcgtcgcagcagccgttccttcttcgttccctacaaccgcctctcccaa
accttacaacgcattcagcgtgaaggtgggaaagtggccagcatcgaacccgctaactag
DBGET
integrated database retrieval system
