Phormidium sp. PBR-2020: JWS08_03895
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Entry
JWS08_03895 CDS
T07578
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
phor
Phormidium sp. PBR-2020
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phor03016
]
JWS08_03895 (truB)
Enzymes [BR:
phor01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JWS08_03895 (truB)
Transfer RNA biogenesis [BR:
phor03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JWS08_03895 (truB)
Prokaryotic type
JWS08_03895 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UCJ14232
LinkDB
All DBs
Position
complement(885476..886402)
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AA seq
308 aa
AA seq
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MIGFLNLNKPLGWTSHDCVAKVRGVLKTKKVGHGGTLDPKASGVLPLAVGRATRLLQYLP
NRKAYEATVRFGLATTTDDLEGDVITQQAVPHLSLAQIEAVIPQFLGRIEQIPPQYSAIQ
VGGKRLYDLARAGVEVEVPSREVEVMGIEVLQWQPGEFPELRLGIRCGGGTYIRAIARDL
GAVLGTGATLAQLERTQSSGFHLADSISLEALIAQVERREDIGPLLFPPEVAISDLPQVR
LPEHLAQRWCLGQRFELEQNQANREADSLAVFREDGQFLGIGTWKIGKSETDTTPKFAPK
FVFFNSSN
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgattggtttcctaaatctcaacaaacccctcggctggacatcccatgattgtgtggcg
aaagttcggggagtgctgaaaacgaaaaaagtaggtcatgggggaaccctcgatcccaaa
gccagcggcgtgttacctctcgccgtcggacgagccacgcgcctgttgcaatatctcccc
aatcgcaaagcctatgaagctacggtgcgttttggtctggccacaacaaccgatgacttg
gaaggagatgtcatcactcaacaggccgtacctcatctgtctctggcgcaaattgaagcg
gtgattccccaatttttgggtcgaattgagcaaatcccccctcaatatagtgccattcaa
gtggggggaaaacggctttatgatttggctcgggctggggtcgaggttgaggttccgtcg
cgagaggtggaggtgatggggattgaggttcttcagtggcagccgggagagttcccagag
cttcgtttgggcattcgctgtggggggggaacctatattcgggcgatcgcccgggatttg
ggggctgttctcggcactggggcgactctggctcagcttgaacgaacccagagcagcggc
tttcatctggcagacagtattagtttagaggcgttaatcgcgcaagtagaacgccgcgag
gatatagggccgctgttgtttcctcctgaggtggcgatctccgatttgccccaggttagg
ctaccggagcatctggcacagcggtggtgtttggggcagcggtttgagttagaacaaaat
caggctaatcgggaggctgactcgttggcggtttttcgagaggatggccagtttttagga
attggaacctggaagattggcaaatcagagactgatacaacgccaaagtttgcccctaag
tttgtcttttttaattcctcaaactag
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