Phormidium sp. PBR-2020: JWS08_04205
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Entry
JWS08_04205 CDS
T07578
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
phor
Phormidium sp. PBR-2020
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phor03400
]
JWS08_04205 (sbcD)
DNA repair and recombination proteins [BR:
phor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JWS08_04205 (sbcD)
Archaeal homologous recombinant proteins
JWS08_04205 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
CNTF
Motif
Other DBs
NCBI-ProteinID:
UCJ13005
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All DBs
Position
complement(982221..983462)
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AA seq
413 aa
AA seq
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MVKVLHLSDIHLGSGFSHGKLDPDTGLNTRFLDFIGTLRRCIDRALEDSVDLVLFGGDAF
PDATPPPYIAEAFAVEFHRLAQANIPTVLLVGNHDRYSLADGSASLGIYRTLAVPNFIVG
DRLDLHSIPTRNGTVQVITLPWLTSSTLLTRPESQGLSIAQINELLAERLRIALEGEIRK
RDRTCPTILLGHLMSDKAKFGAERLLAVSKGFTIPLSLLVRKEFDYVALGHVHKHQNLNP
SNDPPVVYPGSIERVDFSEEKEDKGYVLADVEVGSCRWEFCPLPVRPFLTISVDVSEADD
PQAMLLKTLQKKDLCDRVVRLRYKLRADQLDRINTSELRKALKPAHSATIQPELISQLSR
PRIPSLSGRAIDPLDALHAYLDNREDLRDIREDLVKAAEHLLHEDELPLFRES
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagttctgcatctatctgatatccacctcgggagtggcttctctcacggcaaa
cttgaccccgatacaggactcaatacccgttttctggactttatcggcacccttagacgc
tgtatcgatcgcgccctagaagactccgtcgatctggttctctttggtggggatgccttt
cccgacgccactcccccgccctatattgccgaagccttcgccgtggagtttcaccgcctg
gcccaagccaatatccccaccgtactgctagtcggaaatcacgatcgctactccctcgcc
gatggaagtgccagtctaggaatttaccgaaccctggccgttcctaacttcattgtcggc
gatcgcctggatctccattccatccccactcgcaacggaaccgtacaagtcatcacctta
ccctggctcaccagttccactcttttaacccgtcccgaaagtcaaggcctctccatcgcc
caaatcaacgaactgctggccgaacgcctacgcatcgccctagaaggagaaatccgcaaa
cgcgatcgcacctgtcccacaattctcctgggtcatctgatgagcgataaggctaaattt
ggagccgaacgactcttagcggtgagtaaaggcttcaccattcccctctccctgctagta
cgtaaggaatttgactatgtggccctaggccatgtccacaaacaccaaaatctcaacccc
agtaatgatccccccgtggtctatcccggcagcattgagcgggttgacttcagtgaagag
aaggaagataagggctatgttctagcagacgttgaggtaggttcctgtcgctgggagttc
tgtcccctacccgttcgcccgttcctgaccatctctgttgatgtttctgaggcggatgac
ccccaagccatgctgctcaagacgctccagaaaaaggacctgtgcgatcgcgtcgtccgc
ttacgctataaactgcgagccgaccaacttgatcgcatcaatacctcagaacttcgcaaa
gccctaaaacccgcccacagtgccacaattcaacccgagttaatcagccaactcagtcgg
ccccgcattccctccctcagtggacgggccattgaccccctcgatgccctccatgcctat
ttagacaaccgcgaagacctccgagatatccgcgaggatctcgttaaagccgccgaacac
ctcttacatgaggatgagttacccttatttcgcgagagttaa
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