Phormidium sp. PBR-2020: JWS08_04610
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Entry
JWS08_04610 CDS
T07578
Name
(GenBank) translocation/assembly module TamB domain-containing protein
KO
K09800
translocation and assembly module TamB
Organism
phor
Phormidium sp. PBR-2020
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phor02000
]
JWS08_04610
Transporters [BR:
phor02000
]
Other transporters
Pores ion channels [TC:
1
]
JWS08_04610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
DUF748
Motif
Other DBs
NCBI-ProteinID:
UCJ13073
LinkDB
All DBs
Position
1067644..1073682
Genome browser
AA seq
2012 aa
AA seq
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MTEFSDPTPPTDPQREPQPPRRRRALWAIAILLLTVLAGGTIWGWRFVQYQLAPLLSEEL
GKLLERPIEVGELDRVSLTHVRFGESQVLPSEDQPSQASIEAVHVGFNLVSLLWSRTLPL
DVRLEEVDVTIPQLEDGNWATTDIREPGEPGFIQIQLNRIRIDGGSLTVIPQPKPEFNAS
QPLPNGETPEEETTVNLLDWQPSTESSTESSTESSTDISPNIATTLSTDRSNDISSIDSL
LQVAENSEIAPPEPITLRRFSGDAEFSPDGDRISFNATGYHNITGRLNAQGEFSNPDQAV
NLNLSAQFLQGEVVSPWIPAPLNLEGGEIFGTLSMQLTTDGREAPLNLQGNLRFNDLDLE
LAGVPKPILDGSGRIRLQGDFIAFEEISASYGEDIPMTIPQGLMHLEQGYEIPIVVPATD
WQTITETLDLEFPVEITGELEGVLQVMGDIDNPVLLGEVRNTDVVIVDRLPFSEVQARFG
LSTETSEFVIEQLNATPAEGGGEVQAAVQVELPQQDDEAPVVEAEFIVRNVSADAIARRY
ELPTTGTIGPVNARGTLQNAGEETLIALPIIEIAGGRAQSGLLLQDDTWRLELATESVSL
ASLVPQDIVQDYGVGGFSGQLRLGGIIGVTDLAQLEAFAQGNLQLLGSDIPVQAGLGNGN
WETVFTAENLTPPSRLLPQELAALPLGAISGNLRVNGTVADFDDPNLANLTVGISFTTTI
ADSPLRFDGGLTEGLWQARLVTEGLPLSPFVDVPPDIRLGTFAGRAELAGDVASLQTLSP
QTLEAAIQGQLTVNDGLLRFDGELSDGLWQAQLVTEGLPLSPFLEVPQDIRLGTFAGQAQ
LAGDVASLQTLSPQTLEAAIQGRLTVNDGQVEIASQIAQGDIRGEATAQNVNIAAFIPSR
DLMPSLLSGRGQFRVPLNNISPETLIAQGEMLVVLGEGGLVGTFGLMEGNWQVDADQLQI
PLDPFVDAPVALSPLIKVGEIARLAGSLTDLRPQAISGQLQVGFGFSSLDSLPSRPEDLS
EVVMDITLEDGGWQLLGRLNNADLAQLVPALPPLPTQTAALDVAGRLDGEIALTGGWQEF
TPINIAVQEGIMQVSQFQVGDRRYDPIIAGPITADKEGVLVQLAGQTQTDPSQPRDGFSL
RLTPDLSPQAFALQLGETLAEGALENKLWNLDLANFPLAMLNLQPMEDRGILSGDLTARV
RAAPTGSLVSGALDIQEPRLGLTQADGLQGQFVWANEVLQLDSVELQQGENRYGFDGTIT
ATDDPQFAGAFKIYRGEIQQILEALRWFELDDVQRGLDPATYARADTLTVVGVGNPDASL
IRQLRRLVEIDILLQQQQQAREEASPLPELAQLQGQFSGEVNVAGSLEQGVDFDFNLAGE
NWQWDTYQIHEIASQGEFEQGVWDIQTLNVEANLNDPQVTRLNFNGILGAPEQSGQFVLT
GLPMSVVSEFVEFPEGVRLAGNLNSSATLSGSLENPAARGEIRWNQAQINQQAVQTAQGG
FGLTDGRLNFGAGAVLREEAEPIRLRATLPILFPGATVRPESNSFEIGINAENEGLEVLT
ALTDGALEWLGGEGSLELTIAGEQIGTGFNYVPLATRGRAEFRDAEFNSPQLPEPLTQVN
GTLEFLDDTVVIPELVGQFRQGSVQAAGELPVFSPLPVETPLEVTFDRVELELEGLYSGR
IDGVVRVTNSALFPDLGGQVLLTQGQVFIADEENAGRGGEVADLETPPIISYNNLLLELG
RGVQIVSFPVLNFVADGKLLVNGPFENPEPNGTIFLRDGQVNLFTTTFTLAGRDNTATFD
PQFGLDPVLDVSLRAAVQETTRPRIVSPVGFDRLGTGTEIVDPSIERGGVETIRIEARAQ
GLASRLFEGVPDGEGIVQTPLELTSSPARSQTEILSLIGGGALGTLGRQDPSLVVASSAL
LTQVQSIVGRALGYQDFRLFPAVDPRTSALGLGAEVGVNITDDFSASILTILDRGDSTRF
SVRYRIDDNWLIRGSTNFDDDNRGAVEFQMRF
NT seq
6039 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagttctctgaccccacccctcccacagaccctcaacgggaaccccagcccccc
cgccgccgacgggccctgtgggcgatcgccatcctcctgcttactgtcctcgcaggggga
accatttggggttggcggtttgtgcagtaccaactggccccactgttgtctgaggaatta
ggaaaactcctagaacgaccgattgaggtgggggagttggacagagtttccctgactcat
gttcgttttggcgaatctcaggttctccccagtgaagaccaacccagtcaagccagcatc
gaagccgtccatgtagggtttaatcttgtctccctcctctggagtcgtaccctcccctta
gatgtgcgtctcgaagaggtggatgtgaccattccccagcttgaggatgggaactgggcc
actacggatatccgtgaaccgggagaaccggggttcattcaaattcaactgaaccggatt
cgcatcgatgggggaagtctcacggtgattcctcaaccgaaaccggagttcaacgcctca
caacccctccccaatggcgaaacgcctgaggaggagacgacggttaatctgctagattgg
cagccttcgaccgagagttcgaccgagagttctacagagagttctacagacatctctcca
aacatcgccacgactctctctacagacaggtctaacgatatctccagcattgactcgctg
cttcaggtggccgagaactccgagattgccccccctgaacccatcaccctgcggcggttt
agtggagacgcggaatttagccccgacggcgatcgcatcagctttaacgccacgggctat
cacaacattaccggccgactcaacgcccagggcgagtttagcaacccagaccaagccgtt
aacttaaatctctcagcccaattcctacaaggggaagtagtctctccctggattcccgcc
cccctgaacctagaagggggagaaatctttgggacgctctccatgcagctgaccaccgac
ggccgagaagcccccctcaacctgcaaggaaatctccgctttaacgacctcgacttagaa
ctagccggggttccaaaacccattctcgacggttcaggacgaatacggttgcaaggagac
ttcatcgcctttgaggagatttccgccagttatggagaagatatccccatgaccattccc
cagggcttaatgcacctggaacaaggctatgaaatccccattgtcgtccccgccaccgat
tggcaaaccattaccgaaaccctcgatttggagttccccgtcgagattaccggggaatta
gaaggggtgttgcaagtgatgggagatatcgataatccagtcctgttaggggaagtgcgg
aatacggatgtggtgattgtcgatcgccttccctttagtgaagtccaagcccgatttggc
ctctccacagaaacctcggaatttgtcattgaacaacttaatgcaactcccgctgaggga
ggaggagaggttcaggcggcggtccaggttgagttgccgcaacaggacgatgaggcccca
gtcgtggaggccgagtttattgtccgtaacgtctccgccgatgcgatcgcccgccgctat
gaactccccaccacagggacgattggtccagtcaatgcccgaggaaccctacaaaacgcc
ggcgaagaaactctaattgccctacccattattgaaattgctgggggtcgggcccagagc
ggcctgttattacaagatgatacctggcggctagaactggccacggagtcagtgtctctg
gcgagtctagttccccaagatattgttcaagattacggagtgggtggctttagcggccaa
ctcaggctcgggggaatcattggcgtgaccgatttagcccaactcgaagcctttgcccaa
ggaaacctacaactactaggttcggacatccctgtgcaagccgggttaggcaatgggaat
tgggaaacagtcttcaccgccgaaaacctcaccccgccgtcaagactgttgccccaggag
ttagccgccctaccgttaggggcaatttcgggcaatttgcgagtcaatggaaccgttgcc
gatttcgatgaccccaatctagccaacctcaccgtcggaatctccttcaccacaaccatc
gctgacagtcccctccgctttgatggcggactaaccgagggactctggcaagcccgactc
gtaaccgaaggactccccctatcgccctttgtggacgttccaccagacattcgcctggga
acctttgccggccgggcagaacttgctggggatgtggccagcttacaaaccttgagtccc
caaacccttgaggccgcgattcagggacaactcacggtcaacgacggtctcctccgcttt
gatggcgaactcagcgatggactgtggcaagcccaactggtaaccgaaggacttccccta
tcgccctttttggaggttccgcaagacattcgcctgggaacctttgccggccaggcacaa
ctggctggagatgtggccagcttacaaaccttgagtccccaaacccttgaggccgcgatt
cagggacgactcacggtcaacgacggtcaagttgagattgccagtcaaattgcccaggga
gacatccgtggtgaagcaactgcccaaaatgttaatattgctgcctttatccccagccga
gatctaatgccctcgctgttaagtggacggggacaatttcgggttcctctcaacaacatc
tcacctgaaacattgatagcccaaggcgagatgctcgttgtcttaggtgagggcggcctc
gtgggtactttcggactaatggagggcaattggcaagtcgatgcggaccaactgcaaatt
cccctcgatccctttgtcgatgcccctgttgccctatcgcccctgattaaagtcggggaa
attgcccgtctggccggttccctaaccgacctacgcccccaagctatctcaggacaatta
caagtcgggttcggattcagcagtctggattcactcccgagtcgtcctgaagacctgagt
gaagttgtaatggatatcaccctagaggatgggggctggcaactcctaggccgactcaat
aatgctgatttagcccaactcgttcccgcattaccacccttgccgacccagaccgccgcc
ttagatgtcgctggacgcttagatggggaaatcgccctgacggggggttggcaggagttt
acccccattaacatcgcggttcaagaagggatcatgcaggtgagtcagttccaggtgggc
gatcgccgttatgaccctatcattgccggccccatcaccgctgacaaggagggagtctta
gtccaactggcgggccaaactcaaaccgaccccagtcagcctcgggatggtttctccctc
cgtctgactcctgacttatctccacaagccttcgccctacaactgggggaaactctcgcc
gaaggtgcattggagaataaactctggaaccttgacctggccaacttccccttagccatg
ctcaacctacaaccgatggaggatcgaggcatcctctcaggagatctcaccgctcgtgtg
agagccgcccccaccggctcccttgtctccggggccttagacatccaggaaccccgttta
ggcctcacccaagctgatggtttgcaagggcaatttgtctgggctaacgaagttctacaa
ctcgattccgtcgaacttcaacagggagaaaatcgctatggcttcgatggcaccattacg
gcgactgatgaccctcaatttgccggggccttcaaaatttatcggggggaaatccaacaa
attttagaagccctccgctggtttgaactcgatgacgtgcagcgaggtttagaccccgcc
acctatgccagagcggacaccttaacagtcgtcggagtagggaacccagacgccagcctc
atccggcaactgcgacgactggtggaaatcgacatcctgctgcaacagcaacaacaagcc
cgagaagaagcctcgccgctgccggaattagcccagttacaggggcagttttccggtgaa
gtgaatgtggccggttccctcgaacaaggagttgattttgacttcaacttagccggagaa
aattggcaatgggatacctatcaaattcatgaaattgccagccaaggagaatttgaacag
ggagtttgggatatacagaccctaaatgttgaggcgaacctcaacgacccccaagtgact
cgccttaacttcaacggaattttgggggccccggaacagtcgggacagtttgtcctaacg
ggattacccatgtccgttgtttcggagtttgttgagttcccggaaggggtacgacttgcg
ggaaatcttaattctagtgccaccctctccgggagtctggagaatccggcggctcgggga
gaaatccgctggaaccaggcacaaatcaatcaacaggcggtgcaaacggctcaggggggc
tttggcctcactgatggccgcctcaacttcggggccggggcggtgttacgggaggaggct
gagccgattcgtttgcgggctactctcccgattctgtttcccggcgctacagtgcgccca
gagagcaatagctttgaaattggcatcaatgccgaaaatgaaggattagaggtgttaacg
gcgctcacagatggcgctctggaatggttggggggcgaagggtccctagaactgacgatc
gccggggagcaaatcggcacaggctttaattatgttcccctagccactcggggacgggcg
gagttccgggatgcggagtttaattctcctcaacttccggaacccttaactcaggtcaat
ggaaccctggaatttctcgatgatacggtggtgattccggagttggtgggccagttccgt
caggggtcggttcaggcggccggggagttgccggtgttttcgccgctaccagtggagact
cccttagaggtgacgtttgaccgagtggagttggagttagagggactctatagcggtcgc
attgatggggtcgttcgtgtcaccaattcggcgttgttccccgatttggggggtcaggtg
ttgctgacgcaggggcaggtgtttattgctgatgaggagaacgccgggaggggaggcgag
gtggccgatttggaaacgcccccgattattagttacaacaacctactgttggagttgggg
cgaggggttcagattgtcagtttcccggttctgaattttgtggccgatggcaagttatta
gtcaatgggccgtttgaaaacccggaaccgaatgggacaatctttttgcgggatggacag
gtgaatctgtttaccaccacctttaccctggcgggacgcgataatacggccacctttgac
ccccagtttggtcttgatccggtcttggatgtaagcttacgggcagcggttcaggaaaca
acgcgcccccggattgtttcgccggtgggattcgatcgcctggggacgggaacggagatt
gtcgacccatccattgaacggggtggggtggagacgatccggattgaggcccgggcccag
ggactggccagccgcttgtttgagggggtaccggatggggagggaattgtgcaaaccccc
ctggagttgaccagttctccggcgcgatcgcagacggaaattctctcgctgattggcggt
ggggccctgggaaccctgggccgacaggacccctcgttggtggtggcgagttcggcgctg
ttaactcaggtacaatcgattgtgggtcgtgcgttgggttatcaggattttcgactgttt
ccggcggtcgatcctcgtacgtcggcgttgggactaggggcggaagttggggtgaatatc
accgacgacttctcggcgtctatcctgacgattctcgatcgcggtgattcaactcggttt
agtgtccgctatcgcattgatgataattggcttatccgagggtcaaccaattttgatgat
gataatcgtggggcggtggagtttcagatgaggttttga
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