Phormidium sp. PBR-2020: JWS08_04675
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Entry
JWS08_04675 CDS
T07578
Name
(GenBank) hypothetical protein
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
phor
Phormidium sp. PBR-2020
Pathway
phor00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JWS08_04675
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
phor01007
]
JWS08_04675
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phor03016
]
JWS08_04675
Enzymes [BR:
phor01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
JWS08_04675
Amino acid related enzymes [BR:
phor01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
JWS08_04675
Transfer RNA biogenesis [BR:
phor03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
JWS08_04675
Prokaryotic type
JWS08_04675
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DUF5891
TetR_C_35
Motif
Other DBs
NCBI-ProteinID:
UCJ13084
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Position
1088917..1090356
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AA seq
479 aa
AA seq
DB search
MLNSSSSLTPSSPASLSQREEFHVSTQTIRDRFIQHYQAQGFQTLPRAPMLHPSIPMSFV
MSAGLVQVELSLSRFPDYQGQQFVLVQDCFRHFDLDSIGRDESHLSLFEMPGAFVFGPNA
KASTIRRMWTLATQQLTINPEQLWVSYFAGGELEGNTLAADEETYEAWLELGLAPERLVG
LGVEDNYWQQSRGLGFTGDHPRKCGPNTELFYDLGARPDCDAACGPQCRCGRFLEFSNSL
FIASELEEEHHQIIPLENPFTETVIGTERVAVILQGVSSVFETAEYRPLIELIRQYRQAQ
QLPEGMAEESERILADHLKALWVLVGDGAPPPGKNGRERIVKLLIRRAIARLMVLEIEEA
TFLPVFLAKLVEQWQTHQGSGEAQAVLNQSLVETLLSYIEAESVRFHKTVERGHDKLRQF
IANQVELDHETSLEANLIGIEKNWGLPLPLIELHLWRANIPFNRQQYQDALQRWKSQLR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaattcatcgtcctcgttaaccccgagttctccggcatccctgtcccaaagggag
gaatttcatgtctcaacgcaaaccatccgcgatcgctttatccaacattatcaagctcag
ggattccaaacgcttccccgagcgcctatgttgcatccatcaattcccatgtcctttgtc
atgagtgcgggattggtgcaagtggaactgtctttgtcccggtttcctgattatcagggt
cagcagtttgtgttggtacaagattgttttcgccattttgatttggacagtattggtcgt
gacgagagtcatctgagcctgtttgagatgccgggagcctttgtttttggccccaacgct
aaagcatccacaattcgccgtatgtggaccttggcgacgcagcagttaacgattaatcca
gagcagttgtgggtgtcctatttcgcgggaggagaactcgaaggaaatactttagccgcc
gatgaggaaacctatgaggcctggcttgagttaggacttgcgcctgagcgattggtcggg
ttaggggttgaggacaattactggcaacaaagtcgggggttaggctttaccggtgaccat
cctcgcaaatgtggccccaatacagagttgttttacgatttgggagcgcgtcccgattgt
gatgcggcttgtggccctcaatgtcggtgtggtcgctttttggagttttccaattcccta
tttattgcttcggaactggaggaggagcatcatcagattatccctttggagaatccgttt
acggagacggtcattggcactgagcgggtggcggtgattttgcagggggtctcgtcggtg
tttgagacggctgagtatcgtcctctgattgagttgattcgtcagtatcgccaggcgcaa
cagttaccggaggggatggctgaggaaagtgagcggattcttgccgaccatctcaaggcc
ctctgggtgttagtgggggacggcgcaccaccaccggggaagaatggacgggaacggatt
gttaagttattgattcggcgggcgatcgcgcgtctgatggtgttagagattgaggaagcc
acgtttttgccggtgttcctcgccaagctggttgaacagtggcagacgcatcaggggtct
ggggaggctcaggcggtgttgaatcaatccctggttgagacattgttgagctatattgag
gcggaatcggtgcgctttcataaaactgttgagcggggccatgacaagcttaggcagttt
attgctaatcaggttgaattggatcatgagacctcgttggaggcgaacctcattggtatt
gagaaaaactgggggttgcccctacctctgattgaactacatctttggagggcgaacatt
ccctttaatcgccagcagtatcaagacgcactgcaaaggtggaaatctcagttacgctaa
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