Phormidium sp. PBR-2020: JWS08_04830 Help Entry JWS08_04830       CDS       T07578                                  Name (GenBank) DEAD/DEAH box helicase   KO K10843   DNA excision repair protein ERCC-3 [EC:5.6.2.4] Organism phor  Phormidium sp. PBR-2020 Pathway phor03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:phor00001]  09120 Genetic Information Processing   09121 Transcription    03022 Basal transcription factors     JWS08_04830   09124 Replication and repair    03420 Nucleotide excision repair     JWS08_04830  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:phor03021]     JWS08_04830    03400 DNA repair and recombination proteins [BR:phor03400]     JWS08_04830 Enzymes [BR:phor01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      JWS08_04830 Transcription machinery [BR:phor03021]  Eukaryotic type   RNA polymerase II system    Basal transcription factors     TFIIH      JWS08_04830 DNA repair and recombination proteins [BR:phor03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TFIIH complex      JWS08_04830 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C SNF2-rel_dom DEAD SLFN-g3_helicase Motif Other DBs NCBI-ProteinID:  UCJ13110 LinkDB All DBs Position 1121113..1122789 Genome browser AA seq 558 aa AA seqDB search MTYSPDNALIIQSDRTVLLDVHAPKAEAAQAAIAPFAELVKSPEHIHTYRLSALSIWNAR AAGMPVAAMVAALQDHAKYPMPESVAQEIEALGQRYGLTTLNAGTGGDLRLQVADKPLAE LLQRHEQVGPLLRERLSPTTFAIALGDRGLLKQALLTAGYPAEDLAGYMTGDELPLDLLT TTHSGQPFHLRPYQKTAADLFYQSGQARGGSGVIVLPCGAGKTMVGMAAMAMIQQKTLIL TSNLTSVHQWQQELLDKTTLTADQIAEYSGQHKATGPVTLATYQILTYRASQEDDFLHLG LFDQQAWGLIIYDEVHLLPAPVFRITAQLQARRRLGLTATLIREDGREGDVFTLIGPKRY DVPWRELEGQGFIAAADCTEIRIPQTQERQMDYAIAGRRYQFRIAAENPLKLDVVQTVLE QEAGHRVLIIGEYLDQLKAIAQEVDVPLITGKTSQKKRDRLYASFRSGEISGLILSRVGN FALDLPDADVLIQVSGKYGSRQEEAQRLGRILRPKSDGRKAQFYSLVSLRTCEEDFAQHR QLFLTEQGYRYHIQFWEV NT seq 1677 nt NT seq  +upstreamnt  +downstreamnt atgacctattctcccgacaatgcgctaattatccaaagcgatcgcaccgttctactcgac gtccacgcccccaaagccgaggcggcccaggcggccattgccccctttgccgaactggtc aaaagtcccgaacatatccacacctaccgcctcagtgccctcagcatttggaatgcccgc gccgccggaatgcccgttgccgctatggtggcagcgctgcaagaccatgccaaatacccc atgcccgagtcagtggctcaggaaatcgaggccctgggtcaacggtatggcctaaccact ctaaatgcgggaacgggtggagatttgcggttacaggtggccgataaacccctggcagaa ctcttgcagcgccatgagcaggtggggccactgctgagagaacggttgtcgcccaccaca tttgcgatcgccctgggggatcgcggccttctcaaacaggcgctgctgacggcaggctat ccagcagaagatctggccgggtacatgacgggggatgaactgcccctggacttgttaacc accacccatagcggccaaccctttcacctgcggccctaccagaaaacagccgctgatctg ttctaccagtccgggcaggccaggggcggcagtggggtaatcgtcctcccctgtggtgct ggtaaaaccatggtgggcatggcggcaatggcgatgatccagcagaaaaccctgatcctc accagcaacctcacctctgtccatcagtggcagcaggaactgttggataaaaccactcta accgccgaccaaattgccgagtatagcggtcaacacaaagccaccgggccagtcaccctg gccacctaccaaatcctcacctatcgagccagccaggaggacgactttcttcacctgggg ttgtttgaccagcaagcctgggggttgattatctacgacgaagttcacctcctgcccgcg cccgtctttcgcatcaccgcccaactccaggcccgtcgtcgtcttgggttaaccgccacc ctcattcgtgaagatggccgagagggggatgtgttcaccctcattggccccaaacgctac gacgtgccctggcgagaattggaggggcagggctttattgccgccgccgactgtaccgaa atccgtattcctcaaacccaggaacggcaaatggactatgcgatcgcgggacgacggtac cagtttcgcatcgctgccgaaaatcccctcaagttagatgtggtgcaaaccgtgttggag caagaagctggccaccgagttttaattattggcgaatacctagatcaactcaaagctatt gcccaggaggtggacgttcccctaattaccggcaagaccagtcagaaaaagcgcgatcgc ctctatgccagttttcggagtggcgagatttccggcctcatcctctcgcgagtcggcaac tttgccctcgacctacccgatgccgacgtattaattcaggtctctggtaaatacgggtct cgccaggaagaagcccagcggttagggcgtattctgcgacccaagtcagatggccgcaag gctcagttttacagcctggtgtcactgcgcacctgtgaggaggactttgcccaacatcgc cagttatttttaacggaacagggctatcgctatcacattcagttttgggaagtttag

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