Phormidium sp. PBR-2020: JWS08_04970
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Entry
JWS08_04970 CDS
T07578
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
phor
Phormidium sp. PBR-2020
Pathway
phor02010
ABC transporters
phor03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JWS08_04970
03070 Bacterial secretion system
JWS08_04970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phor02000
]
JWS08_04970
02044 Secretion system [BR:
phor02044
]
JWS08_04970
Transporters [BR:
phor02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JWS08_04970
Secretion system [BR:
phor02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
JWS08_04970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
cNMP_binding
SMC_N
Peptidase_C39
AAA_22
AAA_21
ABC_ATPase
AAA_29
AAA_23
AAA_30
Zeta_toxin
AAA_16
nSTAND3
AAA_18
DUF87
RsgA_GTPase
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
UCJ13135
LinkDB
All DBs
Position
1151220..1154279
Genome browser
AA seq
1019 aa
AA seq
DB search
MTQTTSQPQISDFLAQTAPFDRLTPETRQQLAAKAQLLRYRIGQALLVREKMPAQISLIY
QGQVRVLGYDSRNGHSTSLRLVGPGEVLGWISVVRDLPCETAMASSETICVSINVNDFRE
CLRQEKDFNRAVRDHPSLIEVFELSSAELQRRADATADLKTLCYDLWSEAQIVDIPKGEQ
FDPNRLDANLLWWVSRGELPDAKVGDRLYLARYQNMRLDSSVRLVGVPWSDKIAQGVSST
QLPQATEPGTDSQTDPDGSEGSPNGSPNGNRRTIVTNPSSALANVPEAPPRPPDPPRDPL
APPPRYPHIRGSGPIGSPLACFHMLCKYMRINFRKDAIRKLLEQQLKTKGAVSLYGCGTI
MPTLGVQAQLARIPKTSLGRLQAPGMMKWEDSYAVLYSISEKEIVLAVPEMGVLHRTPAQ
VAEMVEGDVAEVVLVQPPSGDQSEKFSMWWFLPSMLRYKKVLIEVFIASFFVQLFGLANP
LLTQVIIDKVLGQRSIETLNILGVFMIGVALFEALLTSLRTYLFVDTTNRIDLNLGSEVI
DHLFRLPLGYFDKRRVGDIAGRVNELANIRQFVTGTALTVVLDAVFSVIYIAVMLTYSWL
LTAVSLVTVPFFTALIVFVSPIVRRLLLKRAERYADAQSYLVETLNGMQTVKAQNIELTS
RWNWYERYARYMNAGFRTILTNTAASSVAGFLNKISSLLLLWVGAYLVINQELTLGQLIA
FRIISGNVTGSLLRFVQVWQSFQEVGMSIERLRDILNSEPESNDSDRLNIPLPNVEGHVK
FEDVCFRFVPTGPLNVANVNIDFPAGSFVGIVGQSGSGKSTLMKLLQRLYPPETGRIHID
GYDINKVELYSLRRQVGVVLQDTLLFNNTIKANIALNNPEASDEEIINAAKVAVAHDFIM
TLPQGYNTVVGERGSALSGGQRQRIAIARTVLQKPNLLILDEATSALDYNLESLVCQNLV
EEFRGRTVFFITHRLPTVQGADCILMMDNAALVEQGTHEELMALKGRYYCLYEQQQSQL
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgactcagactacctcccaaccccaaatttccgattttctggcccaaacggcacccttt
gaccgcctgacccccgaaacccggcagcaattagcggccaaggcccagctgctgcgctat
cgtatcggtcaagctctgttagtgcgggagaaaatgcccgcccaaatctcgctcatttat
caagggcaagtgcgggttctcggctatgacagccgcaatggtcattccaccagtttgcgc
ttagtgggtcccggagaggtcctcggctggattagtgtggtgcgcgatctcccctgtgaa
accgcaatggcctcaagtgagaccatttgtgtcagcatcaatgtcaacgactttcgcgag
tgtctgcggcaagaaaaagactttaaccgggccgtgcgggaccatccgagcttgatagaa
gtctttgaactcagtagcgccgaactgcaacggcgagccgatgcgacggcggatctcaaa
accctgtgctatgacctctggtctgaggcccaaatcgttgatattcccaaaggagaacag
ttcgacccgaaccgcttagatgccaatctcctctggtgggtcagtcgtggcgaactgccc
gatgccaaagtgggcgatcgcctttatttagcccgctatcagaatatgcggctagatagc
tctgtacgcctcgttggagttccctggagtgacaaaattgctcaaggggtttcctcgact
caactccctcaagccactgaaccgggtacagacagccaaaccgaccccgacggctcagag
gggtctccaaatggctcccccaacggcaatcgcagaaccattgttaccaatcccagcagc
gccctagccaatgtcccagaagccccgccacgaccgccagatccgccgcgagacccttta
gctccgccaccgcgctacccgcatattcgcggcagtggtcccatcggctctcccctggct
tgcttccatatgctctgcaagtatatgcggattaacttccgtaaggatgccatccgtaaa
ttgctggagcagcagttaaaaacgaaaggggccgtctcactctatggctgtggcaccatc
atgcccaccctaggggtacaagctcaactggctcgcattcctaaaacctccctgggacgg
ctgcaggcaccggggatgatgaaatgggaggatagctatgccgtcctctatagcattagc
gagaaggaaatcgtcctagccgtgcccgaaatgggcgtcctccatcgtacccccgcccaa
gtggcggaaatggtggagggggatgtggccgaggttgtcttagtacaacctccctccggc
gaccagtctgagaagttcagcatgtggtggttcctcccctccatgctgcgctataaaaaa
gtcctgattgaggtctttatcgcctccttctttgtccagttgtttggactggcaaaccca
ctgctgacccaggtcatcattgacaaggtgttgggtcagcgcagtattgaaaccctcaat
atcttaggggtgttcatgattggggtggcgttgtttgaggccctgctgaccagtttacga
acctatctgtttgtcgataccaccaaccgcattgacctgaacctcggttcagaggtaatt
gaccacctattcaggcttcccctcggctatttcgataaacgccgggtgggggatatcgcc
ggacgggtgaatgagttggccaacattcgtcagttcgtcaccggaaccgccctaacggtg
gtactcgatgccgtcttctcggtgatttatatcgccgtgatgctgacctacagttggctg
ctaacggctgtttctctggtcacggttcccttctttaccgctttaattgtcttcgtttct
ccgattgtgcggcgactgctgctgaaacgggcagaacgctacgctgacgctcaatcctat
ctcgtcgaaaccctgaatgggatgcagacggtgaaggcgcaaaacattgagttgacctcc
cgctggaactggtacgaacgctatgctcgctatatgaatgcgggcttccgaaccattctg
acgaacactgccgccagttccgtggcgggcttcttaaataaaatctcctccctgttgctg
ttgtgggtgggggcttatttggtgattaaccaggagctaaccctcgggcagctcatcgcc
ttccggattatttccgggaacgtgaccgggtcactgctgcgctttgtccaagtttggcag
agcttccaggaagtgggcatgtcgattgagcgtctgcgggatattcttaactccgaacct
gagagcaacgacagcgatcgcctcaacattcccctgccaaatgtcgaaggacacgttaaa
tttgaagatgtctgcttccgcttcgttcccaccggtccgctgaacgttgccaatgtcaac
attgactttcccgctgggtcctttgttgggattgtcggacaaagtggatcgggtaagagt
accctaatgaagctgctacagcggctttatcccccggaaaccggacggattcatattgat
ggctatgacatcaataaggtggaactctattctctacgccgtcaggtgggggtggtgctg
caagataccctcttgtttaacaacaccattaaggccaacattgctctcaataaccccgag
gcgagcgatgaggagattatcaacgccgcgaaagtagccgtcgcccacgacttcatcatg
accctaccccaaggctataacactgttgttggggaacgggggtcagccctctctggggga
caacgacaacggattgccatcgcccgaacggtgctgcaaaaacccaatctgttgattctc
gatgaagccaccagtgccctggactacaacctcgaaagcctggtttgtcaaaacctcgta
gaagagttccgcggccgcacggtgttctttattacccaccgcttacccaccgtacaaggg
gccgattgtatcttgatgatggacaacgcagctctggtggaacagggaacccatgaagag
ttgatggcacttaaagggcgctactactgtctatatgaacaacaacagtctcagttgtaa
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