Phormidium sp. PBR-2020: JWS08_05245
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Entry
JWS08_05245 CDS
T07578
Name
(GenBank) peptidoglycan DD-metalloendopeptidase family protein
Organism
phor
Phormidium sp. PBR-2020
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M23
LysM
LysM1_NFP_LYK
MutS_II
DUF6444
RHS_repeat
Motif
Other DBs
NCBI-ProteinID:
UCJ13187
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Position
complement(1225535..1227796)
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AA seq
753 aa
AA seq
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MGASALGLAEDTAVAAEPVVKSAPALMPPTLDKTAVMPEEELKTVATPAVTSTSTPAPAD
AQTHAETHVETYSQRRAEPEAKAPVAQEPVQEHVTHLVQSGHTLWRIARAYEVTPASIAT
VNGLPSIETPLEIGEVLRIPVTDTMVYPPREIIAPDSSPRATVAEDESRDTQLAQVTPST
KAHANDDLAAKTSLSSIPNSISDSQHNHQTPSDVASSPLDGEKLGLVDSSEQSSELFFPD
ELGRRVSPDSALDAEAISGSPAPAESLATSDLDLDDHLAAASSDDSSEANLAAVEPDIRL
NRSFLEREGQILETLEPHEVRQGETLISLANRHQTTIEEIARVNGLDDPDQITAGQRLEI
PKQISRRSAPVEVFGEDRGLASVPGKKQRLDLNAATVEDEPLEVALSTLDDERTSNLEAT
SEVPEIAAVPEIAAVPEIVAEIDEIPVIAADSKTPEVATTDELATEELATEIAEVEPSEM
AMPPVSETLTADIARLRDRVRRNDVRRSRPGSSSEPSSTAESTTHVDASDRSLGVVREHS
NPEFDRDQIALARRSEREEDEARASSESDLASANVADSTTADEDRVAVAPLGSQNYAPMM
EPRSVSPELPGLPSSGAYLPKPEQRQEAFDGYIWPAQGVFTSGYGWRWGRMHRGIDIAGP
VGTPIVASAPGTVTYSRWNSGGYGNLVEITHPDGSLTLYAHNHRNLVSEGQDVAQGQQIA
EMGSTGFSTGPHLHFEIHLPGQGPTDPMAFLPR
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgggagcttcagctctcggtctagcagaagacacggccgttgccgctgagccggtcgtt
aagtcagctcctgccttgatgccacccaccctcgataaaacggctgtcatgcccgaggaa
gagctaaaaacggttgccacccctgccgtcacctcgacaagtacccctgcaccggccgat
gcacagacccatgcagaaactcatgtagagacctacagccagcgtcgcgccgaacctgaa
gccaaggcccccgtcgcccaggagccagttcaagagcatgtaacccatctcgttcagagt
ggtcacactctctggcgtattgcccgtgcatacgaggtcactccggcttccatcgccaca
gtcaacggattaccctccatcgaaactcccctagaaatcggtgaagttctcagaatcccc
gtcaccgataccatggtctatccccctcgggagatcattgcccccgactcctctccccga
gctaccgttgccgaggacgagagcagagatacccaactagctcaggtcaccccctctacg
aaagctcacgccaacgatgacctggccgctaagacatcgctcagcagtattcccaactcc
atttcagactctcaacacaaccaccagaccccttctgacgttgccagctccccattggac
ggagaaaagctgggcctggtagactcctctgaacaatcctcagagctatttttccccgac
gaacttggccgccgcgttagtcccgactcagccctcgacgctgaagcaatttcagggtct
cctgctccagccgaatccctggccacgagtgacctcgaccttgatgaccatcttgcggca
gccagcagcgacgactcaagcgaagcaaacctcgccgctgtcgagccagacattcgtctc
aaccgttctttcctagaacgtgaaggccaaatccttgaaactcttgaacctcatgaagtc
cgtcaaggagaaaccttaattagtctggcaaatcgacatcagactaccattgaggaaatt
gctcgggtaaatggtctcgatgaccccgaccaaatcacagcaggacaacgtttagagatt
cccaaacagatttcccgtcgttccgcccccgttgaagtcttcggtgaagatcgcggcctg
gcgtcagttcccggcaaaaaacaacgcttggatctcaatgcagccaccgttgaagatgaa
cccttagaggtggccctgtccaccctggatgacgagcggactagcaatctcgaagccaca
tcagaggttccagaaattgctgccgtcccggaaattgccgccgtcccagagattgtggct
gaaattgacgagattcccgtcatagctgccgattctaaaactcctgaagtcgcgacaacc
gacgagctggcaaccgaagagctggcaaccgaaatcgccgaggttgaaccttccgagatg
gcgatgcccccagtcagtgaaacgctcaccgctgacattgcccgtctcagagatcgagtt
cgtcgtaacgatgtccgcagatcccgcccaggctccagctctgaacccagttcaacggct
gagtctaccactcatgtcgatgccagcgatcgcagtcttggcgtagtccgcgaacacagc
aacccagaatttgatcgcgatcagattgccttagctcgtcgttctgagcgtgaggaagac
gaggcccgtgcctcctccgagtctgacctcgcgagtgctaatgtcgccgactcaacaacg
gctgacgaggatcgagtcgctgtcgcccccctaggctctcagaactacgctcccatgatg
gaaccccgttccgtctccccggaactgcccggtttgccctcatctggggcctatctcccc
aaacccgaacagcgtcaagaagcctttgacggctacatctggcccgctcaaggggtcttc
acctccggttacggctggcggtggggccggatgcaccgaggcatcgatattgctggtccc
gtgggaacccccatcgtagcctcggctcccggaaccgtcacctattcccgttggaactcc
ggtggctacgggaatttggtggaaatcacccatcctgacggcagcttaaccctctatgct
cacaaccatcgtaatttggttagtgaagggcaagatgtggctcaaggacagcaaatcgcc
gaaatgggcagtaccggctttagtaccggtccccacctccatttcgagatccaccttcct
ggccaaggtcccacagaccccatggccttcttaccccggtaa
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