Phormidium sp. PBR-2020: JWS08_05300
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Entry
JWS08_05300 CDS
T07578
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
phor
Phormidium sp. PBR-2020
Pathway
phor00550
Peptidoglycan biosynthesis
phor01100
Metabolic pathways
phor01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JWS08_05300 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JWS08_05300 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
phor01011
]
JWS08_05300 (mrdA)
Enzymes [BR:
phor01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
JWS08_05300 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
phor01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
JWS08_05300 (mrdA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
UCJ14257
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Position
1242771..1244486
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AA seq
571 aa
AA seq
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MMVSITVIMVGGIGARLAYLQLIQGTRNRQLAENNRIRLIPTQPVRGNIFDRNGKILATS
SLSHTVYLWPLAQPPELWPETVERLCEIINIPPEQVLERLDQAGYNSALPIRVARRLTPA
QVIALTEYGPQLPGIEVNVEAVRHYPHGRLAAHVLGYTGEISDENLSRLEAQPDNKYRLG
DIVGQMGVEAAFENELQGEWGGRQVEVDSRGQVLRVLGEKQAEGGRDVQITLDLELQQAA
ERALGDTQGAIVAIDPRDGAVRAMVSRPAFDPNIFSGRITEADWQRLQAARYPFVNRALQ
VFPPASTFKIVTTTAAIESGAYPPYTVLPTYPYITAGGIQFWDWNRSGFGPLSFEGAMAW
SSDTFFYQIAQRIGGEVLIDWTRRYGFGRKSGIELAAEESPGLVPDAAWKERVLGEGWYQ
GDTINMSIGQGYLQASPLQQAMMMAVPANGGYMVRPHLRSLDVDVSYWRESMNLSQDTID
VLRRGLRQVITDGTATNINTSEIPPFAGKTGTAEAPPHLSHAWFAAYAPMDDPEILVVAL
GEHAGKGGGAFAAPMVLEVLKDYFAEEGNRQ
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgatggtcagtatcacagtcattatggtgggtggaattggggcccgcctggcttatctg
caactgattcaagggactcgcaatcgccaactggccgaaaataatcgtatccgtttgatt
cccacccagccggtacgaggaaatatctttgaccgcaatggcaagattttagccacctcg
agtctctcccatacggtctatctttggcccctagcccaaccccctgagttatggccagaa
accgttgaacggctctgtgagattatcaatatccccccagaacaagtcctggagcgtctc
gatcaagctggatataattcggctttgccgattcgtgtggcccgtcgcctgacgccagct
caggtgattgctctgacagaatatgggccgcaactgccggggattgaggtcaatgttgag
gcggtacgccattatccccatggtcgtttggcggcccatgttcttggctataccggtgag
attagtgatgaaaacctatctcgtctcgaagcccaaccggataataaatatcgtcttggg
gatattgtggggcagatgggggttgaggccgcttttgaaaatgaattacaaggggaatgg
ggcggacgacaggttgaggtggacagtcgtggccaagtgttacgggttctgggggagaaa
caggctgaaggggggcgtgatgttcaaattacgctggatttagagctgcaacaggcggcc
gagagggccctgggagatacccagggggcgattgtggcgattgaccctcgtgatggggcg
gtgcgagcgatggttagtcgtccggcgtttgacccgaatattttttcggggcgcattact
gaggcagattggcaacggctacaggcggctcgctatccctttgtcaaccgggcattacag
gtgtttcctccggcaagtacgttcaagattgttaccaccacggcggcgatcgaatctggg
gcctatcctccatatacggttctacccacctatccttacatcaccgctggggggattcaa
ttctgggattggaaccggtctggctttggtccgttgagttttgagggagccatggcctgg
agtagtgatacgttcttttatcagattgcgcaacggattggcggtgaggtgttgattgat
tggacgcgtcgctatggctttggtcgtaaaagtggcattgagttagcggcagaggaatcg
ccaggtttggttcctgatgcggcgtggaaggagcgggtgttaggggaaggctggtatcag
ggggatacgattaatatgtcgattggccagggctatttacaggcctcacctctacaacag
gccatgatgatggcggttccggcaaatggggggtatatggttcgaccccatttacgtagt
ttggatgtggatgtgagttattggcgtgaatcgatgaatctcagccaggacaccattgat
gtcttgagacggggcttacgtcaggtgattacggatggtacggcgaccaatatcaatacg
tctgagattccaccctttgcggggaaaacgggcacggcagaagcgcctccccatctctct
catgcctggtttgctgcctatgctccgatggatgacccggaaattcttgtggttgccctt
ggggaacatgcgggtaaagggggcggggcgtttgcggctccgatggtgcttgaggtgtta
aaggattattttgcggaagaaggcaataggcaatag
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