Phormidium sp. PBR-2020: JWS08_05495
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Entry
JWS08_05495 CDS
T07578
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
phor
Phormidium sp. PBR-2020
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phor03400
]
JWS08_05495
Enzymes [BR:
phor01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
JWS08_05495
DNA repair and recombination proteins [BR:
phor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
JWS08_05495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
FAD_binding_7
DNA_pol_E_B
Motif
Other DBs
NCBI-ProteinID:
UCJ13234
LinkDB
All DBs
Position
complement(1286183..1287694)
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AA seq
503 aa
AA seq
DB search
MTFGIWILGNQLSPSHPALQQIDECERPPILLIESLGFACDRPYHRQKLVLVWSAMRHFA
AELTQAGWDVTYCIEETFATPLTDWINRYRLSEVWLMEPEDIPFKRRLERYELPCPLKFL
DNTLFLWSQTEFLDWAKSRKSLLLESFYRTGRKRFQVLMNGKEPEGGTWNYDKHNRQPPK
GDLQPPKPLSFPPDEVTQAVIEQVKQVSPEGGYGQIKGFAWAVTRSQALEVLDYFLQEQL
PQFGPYQDAMVTREETLWHSLLSPYLNLGLLHPQEVIQAAETAYHQRNLPIASVEGFIRQ
VLGWREYMRGLYLHFGPDYAQSNWFDHDTPLPEFFWDADKTDLNCLHQVLKQVERSGYAH
HIQRLMILGNFATIAGLSPQEVEAWFHAAFIDGYDWVMQTNVLGMALFADGGRLATKPYA
ASANYIHKMSDYCQNCRYDRRSRSSDNACPFNIFYWDFLLRHRDRLKDLGRMNLMLSHLK
RISPTEQAQIQQRAQDWRAAQGG
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgacctttggtatttggattcttggtaatcaactctccccctctcaccccgccttgcag
caaatagacgagtgcgaacgtcctcctatcctcttgattgagtcccttgggtttgcctgc
gatcgcccctatcatcgtcaaaaactggtactcgtctggtcagcaatgcgccacttcgcc
gctgaactgacccaggccggctgggatgtcacctattgcatcgaggaaaccttcgcaaca
cctctgacggactggattaaccgctatcgcctctcggaagtctggctcatggaacctgaa
gacatcccctttaagcggcgtctggagaggtacgagcttccctgtcccctcaaattccta
gataatacactctttctttggtctcaaacggagtttttggactgggccaagtcccgcaag
tctttgttactcgaatccttctatcgaacgggtcgaaaacgctttcaggtgttaatgaat
ggcaaggaacctgaaggaggaacctggaactatgacaaacacaatcgccaacctcccaaa
ggagacttacagcctcccaaacccctgagttttccgccggatgaagtcactcaggcggtg
atagaacaggtcaaacaggtctccccagagggtggctatggccagatcaagggctttgct
tgggccgtgacgcgatcgcaggccctagaagtcctggactatttcctccaggaacaactg
ccccaatttggtccctatcaagatgccatggtcactcgagaggagaccctttggcattct
ctgctctctccctatctcaatctcggtttactccatccccaggaggtcatccaggccgct
gaaaccgcctaccaccagaggaatctacccatcgccagtgtagaaggatttatccgacaa
gttcttggctggcgggaatacatgcggggactgtatctccattttggccccgactacgcc
cagagtaactggtttgaccatgatacgcccctaccggagtttttctgggatgctgacaaa
accgatctcaactgtttacatcaggtgcttaaacaagtcgaacgcagtggctatgcccac
catatccaacgcttaatgattttggggaattttgccaccatcgccggcttgtcgccgcaa
gaggtagaggcttggtttcacgcggcttttattgatggctatgattgggtcatgcaaacc
aatgtcttgggaatggccctattcgccgatgggggacgcttagccaccaaaccctatgcc
gcctccgccaactatatccataaaatgagcgattattgccaaaactgtcgctacgatcgc
cgttcccgctccagtgacaacgcctgtccctttaacattttctattgggacttcctcctc
cgacaccgcgatcgcctcaaagacctcggacggatgaatttgatgttaagccatctcaaa
cggatttcccccacagaacaagcccaaattcagcaacgggcccaagactggcgggcagct
caggggggataa
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