Phormidium sp. PBR-2020: JWS08_05875
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Entry
JWS08_05875 CDS
T07578
Name
(GenBank) S-layer homology domain-containing protein
Organism
phor
Phormidium sp. PBR-2020
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLH
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
UCJ13299
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All DBs
Position
1378217..1381042
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AA seq
941 aa
AA seq
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MGLGKDCYTLEVSPLSAALVMVRSFDLIVFGDEVPGILALVTAARELRQRTGTWPRSLLM
LKGAATDPIGGHLVRGGLSYLDRSGIPIELRQRHGLATFGDPPAIYQEFLTRAQVDLIAL
DPKRANPALRAMLGEVGALMTGQVEIAEVLKTGARISGLRLTRGETFLAKQFIDATVNAE
LAQQAGVKKLQGFATFGLPEAELPVTLCFETEGVTVAKVREVENYYFHHLLDTQSPLGQE
WLKRASGGDLGIAKFLRDSLTNAQGQPLRLYSDRDFIDVRSRALSIGYHARRNKPFSLKD
SGFLLDNGNVAILPGNRLSWNSLLWFVTGAEAEALARNQALPTEAILGEFEQVRRWFMET
FGASEVRPAAELYIRHAGNIAGAVSPLSGAQMLDGGVPAEEALATFGYHFDVRGGIEGLG
KKARAKGYDSVSVQAKPVFNVGIRQAQVKGIPNLAVVSPASDFPGYASSAGRIVEYSVGV
AQGLGIAAAIALDQGRQLSEITNLEVRQVLAQRGRLSKVYGIRQADAAQYLADFEKALAP
DDLELEPTGELRDIAGHWAQPFIEALFEREIIAGMGHRRFMPDEPLTRAAFAAILAKAFD
IPSVRDPQVFLDVSAGFWGYQAILKANQMGFIAGFPNGSFRPEELVTRTQAWVAVVNGLN
LAPEADVELLSFYGDRHQIPSYAQTAVARATQAQLVANYPNRRQLQPQASMTRAEVAVTV
YQALVTLGKLPEIESPYVITARTLAAPPFTDLDGHWTAEFVMALTGKGLISGYPDKTFRP
DAPLSRAAFAALLAQAFDPEPVREAIAFRDVSPGFWAAKAIQQVARGGFMAGVGGDRFAP
NLNLQRLSIWLALVNGQNLGEADVSKLQPFQDAGEIPTAAKPAVAMALKRGLVVNYPEGD
RLNPNRDATRGEVAVILYQALLDAGLWDFEAIDSPYLIQPR
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
gtgggtctgggaaaggattgctatacactggaagtctctcccctatcggcggctctggtt
atggttcgcagctttgatctaattgtttttggtgatgaagttcccggtattttggctctg
gtgacagccgctcgtgagttgcgccagcggacggggacttggccgcgatcgctcctgatg
ctcaagggagcggcgacggaccccattggcggccatttggtacgagggggactctcctat
ctcgatcgcagtggtatccccattgagctgcggcaacgtcatggtttagcaacatttggc
gaccccccagccatttatcaagaatttctgactcgcgctcaggtggatttgattgccctt
gaccccaaacgggctaatccggccttacgagccatgcttggggaagtgggggccctgatg
acgggacaggtggagattgccgaggtcttaaaaacgggggcccgtattagtggcttgcgt
ttgacgcgaggtgagacgtttttggcgaagcagttcattgatgccacggtgaacgcggaa
ctggctcaacaggcgggggtgaagaagttacaaggctttgccacctttggactccctgaa
gcggaactgccggtgaccctctgttttgaaacggaaggggtgacggtggccaaggtgcgc
gaggtggaaaattactatttccatcatctcttggatactcaaagtcccctaggtcaagag
tggttaaaacgagcctctgggggagatttgggcattgctaaatttttacgggattctctg
accaatgcccagggacagccgttgcgactctacagcgatcgcgattttattgacgtgcga
tcgcgggccctgagtattggctatcatgctcgccgcaacaagcccttttccctcaaggac
agtggctttctcctcgacaatggcaatgtggccattctgccaggaaaccgtctctcctgg
aactccctattatggttcgtcaccggtgcagaagccgaagccctggcccgtaatcaggcc
ctgcccacggaggctattttaggggagtttgaacaggtgcgtcgttggtttatggagacc
tttggcgcgtcagaggtgcggccggcggctgaactctatatccgtcatgcggggaatatc
gccggggcagtgagtcctctcagtggcgctcagatgctcgatggtggggttccggcagag
gaggcgttggctacttttggctatcactttgatgtacggggagggattgaagggttaggc
aaaaaggcgcgggccaagggctatgacagtgttagtgttcaggcgaaaccggtgtttaat
gtgggcattcgtcaggcccaagtcaaagggattcccaatttggcggtggtgagtccggcg
tcggattttcccggttatgcctcttcggctggacggattgtggaatacagcgtgggggtg
gcgcaagggttgggtattgccgctgcgatcgccttagatcagggccgacaactctcggaa
attaccaatttagaggtgcgtcaggtgttggcgcaacggggacggctctcgaaagtctat
gggattcgtcaagcggatgcggctcagtatttggcggactttgagaaggccttagccccg
gatgatctcgaactcgagcctacgggggaattacgggatattgcgggccattgggcgcag
ccgtttattgaggcgttgtttgagcgggagattattgctgggatgggccatcgccgcttt
atgccggatgaaccgttgactcgggctgcgtttgcggcgattctggctaaggcctttgat
atcccctcggtgcgggaccctcaggtgtttttggatgtctcggcggggttttggggctat
caggcgattctgaaggcgaatcagatggggtttattgccgggttccccaatggtagtttt
cgcccggaggagttggtgacccggactcaggcttgggtggcggtggtgaatggcttgaat
ttagcgcctgaggcggatgtggagctgttgtcgttttacggcgatcgccatcagatcccc
agttatgctcagacggcggtggcccgagccactcaggctcagttggtggccaattacccc
aatcgccgccagttgcaacctcaagcctcgatgacgcgggcggaggtggcggtgacggtg
tatcaggcgttggtgacgttggggaaactgcctgagattgagtcgccttatgtgattacg
gcgcggacgttggcagcgccaccctttacggatttagatggccattggacggctgagttt
gtgatggcgttgacagggaaggggttaattagcggttatcccgataaaacctttcgcccc
gatgcgcctctgtcccgggcggcgtttgcggcgttgttggctcaggcctttgaccccgag
ccggttcgcgaggcgatcgcctttcgggatgtgtcgccgggattttgggcggctaaggcg
attcaacaggtggctcggggtgggtttatggccggggttgggggcgatcgctttgccccg
aatctcaatttacagcggctctcgatctggttggcgttggtgaatggccagaatttgggc
gaggcggatgtctcgaagttgcagccgtttcaggatgcgggggagattcccacggcggct
aaacccgctgtggctatggcccttaagcggggattggtggtgaattatcctgagggcgat
cggctcaaccccaatcgggatgcaactcgtggggaagtggcggtgattctctatcaggcg
ttactcgatgcgggattatgggacttcgaggcgatcgactcgccctatctcattcagcct
cggtag
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