Phormidium sp. PBR-2020: JWS08_06835
Help
Entry
JWS08_06835 CDS
T07578
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
phor
Phormidium sp. PBR-2020
Pathway
phor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JWS08_06835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phor03021
]
JWS08_06835
03400 DNA repair and recombination proteins [BR:
phor03400
]
JWS08_06835
Enzymes [BR:
phor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JWS08_06835
Transcription machinery [BR:
phor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JWS08_06835
DNA repair and recombination proteins [BR:
phor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JWS08_06835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RNA_pol_L_2
HHH_2
Motif
Other DBs
NCBI-ProteinID:
UCJ13475
LinkDB
All DBs
Position
1590726..1591697
Genome browser
AA seq
323 aa
AA seq
DB search
MGNQYSGGHAVAQFQIECVESNTEKDQGQYGKFTVEPLERGQGTTVGNALRRVLLSNIEG
TAVTAVRIAGVNHEFATIPGVREDVLEILLNMKEVVLKNHGGQPHIGRLMVQGPAMVSAE
NFDLPSEVEPTSANQYIATLAEGATLEMEFKIETGIGYRSVDRSRDEGGSLDFLQIDAVF
MPVRKVNYTVEDARIGGSLDKDRLILEIWTNGSISPQEALSQAAKILVELFTPLQDITLE
SLKDDYTPDEDPTSQIPIEELQLSVRAYNCLKRAQINSVADLLDYSQEDLLEIKNFGQKS
AEEVIDALQERLGITLPQEKAKA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggggaatcagtattcgggaggtcacgccgtggcgcagtttcaaatcgaatgtgttgaa
agtaacactgaaaaagaccaaggacaatatggcaagttcacggtcgaacccctagaacgg
ggacaaggaaccaccgttggcaatgccctgcggcgagtcctgttgtcaaacattgaagga
accgccgtaacggctgtccgcattgccggtgtgaaccatgagtttgccaccattccagga
gttcgtgaggatgttctggaaatcttgctgaacatgaaagaggtggtactcaaaaaccac
ggcggtcaaccgcacattggccgtttgatggttcagggaccagccatggtcagtgccgaa
aattttgatctcccatctgaggttgaacccacctcagccaaccagtacattgccaccctg
gcagaaggggcaaccctggagatggagttcaaaatcgagaccggaatcggctatcgttcc
gttgatcgcagtcgtgatgaaggcggttctctggattttctgcaaatcgatgccgtgttt
atgccggtccgcaaagtcaactacaccgtagaagacgcgcgcattggcggctccctggat
aaggatcggctgatcttggaaatttggaccaatgggagtatttcaccccaggaagccctc
agccaagccgccaaaatcttggtagagttgtttacacctctgcaagacattaccctcgaa
tcgcttaaagacgattacacccctgacgaagaccccaccagccaaattcccattgaggaa
ttgcaactgtcggttcgggcctataactgcctgaaacgcgctcagatcaactccgttgcc
gatttactggattactcccaagaagacctcttagagattaagaacttcggtcaaaaatcg
gcagaagaggtgatcgacgcccttcaagaacgtttggggattacccttcctcaagagaag
gccaaagcctaa
DBGET
integrated database retrieval system
