Phormidium sp. PBR-2020: JWS08_07165
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Entry
JWS08_07165 CDS
T07578
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
phor
Phormidium sp. PBR-2020
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
JWS08_07165
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
HHH_3
Tex_N
HHH_9
S1
YqgF
S1_RRP5
HHH_7
T2SSK
HHH_6
Motif
Other DBs
NCBI-ProteinID:
UCJ13534
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Position
1659737..1661902
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AA seq
721 aa
AA seq
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MATLNRQLAQLLSREFSLTPHHVSNALELWLDGATIPFIARYRKERTGEMTEVVLRELFE
RYGYLSELEERKTAILEAISAQGKLTEALERKILACQQKTDLEDLYLPYRPKRRTRATIA
RERGLEPLAEAIAAHNRPQAPRFDLEGEAAKFVNPEGEVETTEVALQGAADILAETIAED
AEIRAGLRQTLLEQGSFESRIKKDYPEGSTKYETYRNYQISSRKIAPHNLLALLRGEREG
ILDLKLTHDDERFLQQLSNRLIRTGDRRLRQFYQDLIQDAYKRLLQPSITNRVIGEKRDW
ADEASIETFEANLRALLLAAPAGRKATLGIDPGFRTGCKVAVISELGKFLTYETIFPHQS
GKRRQEAAQTLRKLVNTYGIELIAIGNGTASRETERFVKEGLQGVENPPIALLVNEAGAS
VYSASEVAIAEFPELDVTIRGAISIARRLQDPLAELVKIDPKSIGVGQYQHDVNQTLLKR
KLAETVESCVNYVGVDLNTASAALLTSVSGLSKTVANNIVAYRDEQGAFRNRRQLLKVPK
LGPKAFELSAGFLRVRDGENPLDNTAVHPERYGVVGAIAKDLGLSLAQPEGIAQGMRSRD
LRSYVTEEVGEPTLRDILEELEKPGRDPRDEFTYASFKEGVETLADLEEGMLLEGVVTNV
ANFGAFVDVGVHQDGLVHISQLANRFVRDPNEIVKVGDVVKVKVLSVDERLKRIGLSMKE
V
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgctgaatcgacaactagctcaacttctctctcgggagttctcgttgactccc
catcatgtctcgaatgccctcgaactctggcttgatggggcaacgattccctttatcgcc
cgctaccgcaaggaacgcactggggaaatgacggaggtggtgttacgggagttatttgag
cggtatggctatttgagtgagttggaggagcgcaaaactgcgattttagaggcgatttcg
gctcaggggaaactgacggaggccctagagaggaagattttggcctgtcagcaaaaaacc
gatttggaggatctctatcttccctatcgccccaaacgccgcactcgggctaccatcgcc
cgagaacgagggttagaaccgttggcagaggcgatcgccgctcataatcgtccccaagct
ccccgctttgatttggagggggaagcggcgaagtttgtcaacccagagggagaggtggag
acgactgaggtagcccttcagggagcggcggatattttggccgagacgatcgctgaagat
gcggagattcgcgctgggttacgtcagacgctcttggaacaggggagttttgagtcgcgg
attaagaaagactacccggaaggaagcacgaagtacgaaacctatcgcaattatcagatt
tcgagtcgtaagattgcccctcataatctcttggctctgttgcgtggggaacgggagggg
attttggatctcaagctgactcatgatgatgagcggtttttgcagcagttgtcgaaccgc
ctcattcgcacgggcgatcgccgtttacgtcagttctatcaggatttgattcaagatgcc
tataaacgtctgttgcagccctccattaccaatcgggtaattggggaaaaacgagattgg
gccgatgaggcctcgattgagacgtttgaggccaatttacgggccttgctgttggcggct
ccggcgggccgcaaggcaactctgggcattgatccaggattccgcacgggctgcaaggtg
gcggttattagcgagttgggtaagtttttgacttatgaaaccattttcccccatcagtcg
ggtaaacgccgccaggaggcagcgcaaacgctacgaaaattggtgaatacctatggtatt
gagttgattgccataggcaatggaaccgccagtcgggagacggaacggtttgttaaggag
gggttgcagggggtggagaatccgccgatcgccctgttggtgaatgaagcgggtgcgtcg
gtgtattcggccagtgaggtggcgatcgccgagttcccggaactggatgtgacgattcgt
ggggccattagtattgcgcggcggttacaggaccctctggcggagttggtgaaaattgac
cctaaatccattggggtggggcaatatcagcatgatgtgaatcagacgttactgaagcgg
aaactggcggagacggtggagagttgcgtcaactatgtgggagtggatctcaatacggcg
tcggcggcgttgttaacgtcggtgtcggggttgtcgaagacggtagccaacaatatcgtg
gcctatcgcgatgaacagggggcgttccgcaatcgtcgccagttgttgaaggttcccaag
ttggggccgaaggcctttgagttgtcggcggggtttttgcgggtgcgcgatggggagaat
cccttggataatacggcggttcacccggaacgctatggagttgttggggcgatcgccaaa
gatttagggctatcgttggcgcaacctgaaggcatcgctcaggggatgcgatcgcgagat
ttacgcagttatgtgacggaggaggtgggggaaccgacgttacgagacattttggaggag
ttggagaaaccgggacgagatcctcgggatgagtttacctatgccagtttcaaggagggg
gttgaaactttggcggacttagaggaagggatgctgttagagggagttgtcacgaatgtg
gctaattttggcgcgtttgtggatgtgggggtacatcaggatggtttggtccatatttct
cagttggcgaatcgctttgttcgcgatcctaatgagattgtcaaggtgggggatgtggtg
aaggtgaaggtgttatcggtggatgaacggttgaagcggattggtttgtcgatgaaggag
gtttag
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