Phormidium sp. PBR-2020: JWS08_07350
Help
Entry
JWS08_07350 CDS
T07578
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
phor
Phormidium sp. PBR-2020
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phor03016
]
JWS08_07350
Enzymes [BR:
phor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
JWS08_07350
Transfer RNA biogenesis [BR:
phor03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
JWS08_07350
Prokaryotic type
JWS08_07350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
UCJ13569
LinkDB
All DBs
Position
1699480..1700433
Genome browser
AA seq
317 aa
AA seq
DB search
MEIVFLGTSSGVPTRSRNVSSLAVRLKQRGEVWLFDCGEGTQHQLLQSDLKVGRIRRIFI
THMHGDHVFGLMGLLASIGLAGAPDRIDLYGPPQLETYLDACARYSHTHLHYPITVHKHT
PGLIYEDEDYRVLCDRLDHRIPAYGYRVEERDRPGRFDVAKAQAIGIPPGPIYGQLKQGQ
RVTLEDGRVIQGRDLCGDPQPGRTLVYCTDTIYCENAVRLSQGADVLIHEATFSHRDATL
AQQRLHSTSTMAAQVALGAGVKKLFMTHFSPRYAPGNDLDLTDLLSEARAIFPQTDLAYD
FLTYEVPKPSQAVAISR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
gtggaaatcgtttttttaggaaccagttcaggtgtcccaacgcgatcgcgaaatgtatca
agtctggccgtacggctgaaacagcgaggtgaagtttggttatttgactgtggagaaggg
acgcaacatcaactcctccagagtgatctcaaggtggggcggattcgccgtatttttatt
acccatatgcacggggatcatgtgtttggcttaatgggactcttggcgagcattggccta
gcgggagcgcccgatcgcattgatttgtatggtcccccacaactcgaaacctatctcgat
gcttgtgcgcgctattcccatacccatttgcactatccgatcacggtgcataagcataca
ccggggctgatttatgaggatgaggactatcgggtgttgtgcgatcgcctcgatcaccgg
attccggcctatggctatcgagttgaggagcgcgatcgcccaggacgctttgatgtggcc
aaggcccaggccatcggtattccccccggccctatctatggccaactcaaacaaggacaa
cgggtgacgttagaggatggacgagtcatccagggtcgggatctctgtggcgatccccaa
ccgggacggacgttagtctattgcacggatacaatctattgcgagaatgcggtgcgatta
tctcaaggggctgatgtgttgattcacgaagcgacattctcacaccgagatgcaaccttg
gctcaacagcggttacattcaacgtccaccatggcagcacaggtggctctcggcgctggg
gtcaaaaaacttttcatgactcactttagtcctcgatatgccccagggaatgatcttgat
ttaacggatttgttaagtgaggctcgggcaattttcccacaaactgacctcgcctatgac
tttctaacctatgaggttcccaagccatctcaggctgttgcgatatcccgttaa
DBGET
integrated database retrieval system
