KEGG   Phormidium sp. PBR-2020: JWS08_07350
Entry
JWS08_07350       CDS       T07578                                 
Name
(GenBank) ribonuclease Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
phor  Phormidium sp. PBR-2020
Brite
KEGG Orthology (KO) [BR:phor00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:phor03016]
    JWS08_07350
Enzymes [BR:phor01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     JWS08_07350
Transfer RNA biogenesis [BR:phor03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    JWS08_07350
 Prokaryotic type
    JWS08_07350
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B Lactamase_B_4 Anti-Pycsar_Apyc1 PDEase_II
Other DBs
NCBI-ProteinID: UCJ13569
LinkDB
Position
1699480..1700433
AA seq 317 aa
MEIVFLGTSSGVPTRSRNVSSLAVRLKQRGEVWLFDCGEGTQHQLLQSDLKVGRIRRIFI
THMHGDHVFGLMGLLASIGLAGAPDRIDLYGPPQLETYLDACARYSHTHLHYPITVHKHT
PGLIYEDEDYRVLCDRLDHRIPAYGYRVEERDRPGRFDVAKAQAIGIPPGPIYGQLKQGQ
RVTLEDGRVIQGRDLCGDPQPGRTLVYCTDTIYCENAVRLSQGADVLIHEATFSHRDATL
AQQRLHSTSTMAAQVALGAGVKKLFMTHFSPRYAPGNDLDLTDLLSEARAIFPQTDLAYD
FLTYEVPKPSQAVAISR
NT seq 954 nt   +upstreamnt  +downstreamnt
gtggaaatcgtttttttaggaaccagttcaggtgtcccaacgcgatcgcgaaatgtatca
agtctggccgtacggctgaaacagcgaggtgaagtttggttatttgactgtggagaaggg
acgcaacatcaactcctccagagtgatctcaaggtggggcggattcgccgtatttttatt
acccatatgcacggggatcatgtgtttggcttaatgggactcttggcgagcattggccta
gcgggagcgcccgatcgcattgatttgtatggtcccccacaactcgaaacctatctcgat
gcttgtgcgcgctattcccatacccatttgcactatccgatcacggtgcataagcataca
ccggggctgatttatgaggatgaggactatcgggtgttgtgcgatcgcctcgatcaccgg
attccggcctatggctatcgagttgaggagcgcgatcgcccaggacgctttgatgtggcc
aaggcccaggccatcggtattccccccggccctatctatggccaactcaaacaaggacaa
cgggtgacgttagaggatggacgagtcatccagggtcgggatctctgtggcgatccccaa
ccgggacggacgttagtctattgcacggatacaatctattgcgagaatgcggtgcgatta
tctcaaggggctgatgtgttgattcacgaagcgacattctcacaccgagatgcaaccttg
gctcaacagcggttacattcaacgtccaccatggcagcacaggtggctctcggcgctggg
gtcaaaaaacttttcatgactcactttagtcctcgatatgccccagggaatgatcttgat
ttaacggatttgttaagtgaggctcgggcaattttcccacaaactgacctcgcctatgac
tttctaacctatgaggttcccaagccatctcaggctgttgcgatatcccgttaa

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