Phormidium sp. PBR-2020: JWS08_07650
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Entry
JWS08_07650 CDS
T07578
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
phor
Phormidium sp. PBR-2020
Pathway
phor00521
Streptomycin biosynthesis
phor00523
Polyketide sugar unit biosynthesis
phor00541
Biosynthesis of various nucleotide sugars
phor01100
Metabolic pathways
phor01110
Biosynthesis of secondary metabolites
phor01250
Biosynthesis of nucleotide sugars
Module
phor_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JWS08_07650 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JWS08_07650 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JWS08_07650 (rfbC)
Enzymes [BR:
phor01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
JWS08_07650 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UCJ13617
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Position
complement(1768022..1768570)
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AA seq
182 aa
AA seq
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MNVISTEIPDVLLLEPQVFGDHRGFFFESFNQKRFEDKTGVKTQFVQDNHSRSSQGVLRG
LHYQIQQAQGKLLRATVGEIFDVAVDIRKQSPTFGQWVGYRLSAENKRQLWIPPGFAHGF
AVLSDVAEVLYKTTDYYAKEHERSILWNDPGLAIDWQLGDIEPRLSAKDEAGVLLKDAEV
FE
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttatttccactgaaattcctgacgtgttactccttgaacctcaagtctttgga
gaccatcgaggcttcttttttgaaagtttcaatcagaaacgctttgaagacaaaactggc
gttaaaacccaatttgttcaagacaatcactcccgttctagtcaaggagttctgcgggga
ttgcattatcaaatccagcaagcccaaggcaagttattacgagccactgtgggagaaatc
tttgatgtggcagtggatattcgcaaacaatccccaacctttggccaatgggtgggctat
cgattgagtgccgaaaacaaacgacaactctggattcctccaggctttgcccatggtttt
gctgtcctctccgacgtggcagaagtgctatataaaaccaccgactattatgctaaagag
catgaacgtagtattctctggaatgacccgggtttggccattgattggcagttaggagac
attgaacctcgactgtccgccaaagatgaagccggggtgttgctgaaagatgcggaggta
tttgagtaa
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