Phormidium sp. PBR-2020: JWS08_09055
Help
Entry
JWS08_09055 CDS
T07578
Name
(GenBank) rRNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
phor
Phormidium sp. PBR-2020
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phor03009
]
JWS08_09055
Enzymes [BR:
phor01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
JWS08_09055
Ribosome biogenesis [BR:
phor03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JWS08_09055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
UCJ13852
LinkDB
All DBs
Position
2109928..2110731
Genome browser
AA seq
267 aa
AA seq
DB search
MEERLQKLLSHWGIASRRRAEELIRQGRVSLNGSTAELGAKAHPGRDRILVDGRVANPEQ
EPQRLYILLNKPAGVVSTCRDTHGRPTVLSLLPPRLTQGQGLHPIGRLDADSTGALLLTN
DGSLTYALTHPRYHVPKTYQVWVQGSPSEVTLQQWRDGVILDQRKTLPAQVQVKRRDGNR
CTQLEVVLTEGRNRQIRRIAEQLGYPVKGLHRTKIASVDLNDSPENVLPPGCHRRLTESE
INALQSWQTQLTLKSVGVRSKLKEHSG
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtggaagaacgactacaaaaactcttatctcactggggcatcgcctcccgacgccgtgcc
gaagagttgattcgtcaaggacgagtcagcctcaatggttctacggccgaattgggggcg
aaagctcatcctggacgcgatcgcatcctcgttgatggtcgcgtcgctaatcctgaacaa
gaaccgcaacgactgtatatcctcctcaacaaaccggccggtgtcgtcagcacctgtcgt
gacacccatgggcggcccactgtcctcagtcttctaccgccccgacttactcaaggacaa
gggcttcatcccattggtcgtcttgacgctgactcgactggggccttattactgacaaat
gatggcagtcttacctatgctttaacccatcctcgctatcatgtacccaagacctatcaa
gtttgggtccaaggctctccttcagaggtaacattgcaacaatggcgagacggggtcatc
ctagatcaacgcaaaactctaccggctcaagtacaagtcaaacgtcgggatggcaacagg
tgcactcagctagaagtggtgttaactgagggccgcaaccgccaaattcgtcgtattgct
gaacaactcgggtatccagtgaaagggctacaccggacaaaaattgcctcggttgacctc
aacgacagcccagagaatgtcttacccccagggtgtcatcgccgtttgaccgaatcagaa
attaatgctttacagtcatggcaaacgcaactcaccctaaaatcagtaggcgtgcgatcg
aagctcaaggagcacagcggatga
DBGET
integrated database retrieval system
