Phormidium sp. PBR-2020: JWS08_09980
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Entry
JWS08_09980 CDS
T07578
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
phor
Phormidium sp. PBR-2020
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phor03016
]
JWS08_09980
Enzymes [BR:
phor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
JWS08_09980
Transfer RNA biogenesis [BR:
phor03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
JWS08_09980
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
PfUIS3
Motif
Other DBs
NCBI-ProteinID:
UCJ14015
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All DBs
Position
2310326..2310955
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AA seq
209 aa
AA seq
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MTLENFRVCDGDLDEDLLNRYSQGSLLAVDTETMGLLPARDRLCLVQLCDISGMVTVVRI
QRGQTQAPRLKQVLEAATVEKIFHFARFDVAMLQQHLGIQTQPIFCTKIASKLARTYTSS
HGLKALVMELEGVELDKRAQSSDWGNAAHLSEEQLSYAANDVRYLISLKQSLTMMLQREE
RLPLAQECFAVIPVFVALDLLHYSHIFEH
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgactttagagaattttcgcgtctgtgatggtgatctcgatgaggatctgttgaatcgc
tacagtcaaggttcactgttggctgtggatacggaaacgatggggctactgccggcccgc
gatcgcctctgtttggtccaattatgtgacatctcgggcatggtgactgttgtgcggatt
caacggggtcaaactcaggcgcctcgtctgaagcaggtactggaggcggcaacggttgag
aagatttttcatttcgctcgctttgatgtggcgatgctgcaacagcacttgggaattcag
acgcagcccattttttgcaccaaaattgccagcaaattggctcggacttatacctcatct
catggcttaaaagctttggtgatggaactcgaaggagtggaactcgataaacgggcccaa
agttcggattggggcaatgcggcgcatctctctgaggagcagttaagctacgcggcgaat
gatgttcgctatctgatttctctgaaacagagtttaacaatgatgttacagcgagaagag
cgtttaccccttgcgcaagagtgttttgcagtaattcccgtctttgtggcgttggatcta
ttgcactactcccatatttttgagcattaa
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